RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 HMG20BQ9P0W2 317 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 ZC3H7BQ9UGR2 993 aaKnown RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 ADAMTS8Q9UP79 889 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 NOSIPQ9Y314 301 aaKnown RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 DDX49Q9Y6V7 483 aaKnown RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 EIF2AK4Q9P2K8 1649 aaKnown RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 DLC1Q96QB1 1528 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 RAD50Q92878 1312 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 SHISA3A0PJX4 238 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 MYO1GB0I1T2 1018 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 H0Y858 1186 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 DIAPH2O60879 1101 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 ANXA6P08133 673 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 TPBGLP0DKB5 382 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 FPR2P25090 351 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 SERPINA4P29622 427 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 AVPR2P30518 371 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 IDUAP35475 653 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 CASP9P55211 416 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 ADARP55265 1226 aaKnown RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 YPEL5P62699 121 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 PPATQ06203 517 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 CETN1Q12798 172 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 LMAN2Q12907 356 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 NPRL3Q12980 569 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 TRA2AQ13595 282 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 PTK6Q13882 451 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 HABP2Q14520 560 aaPredicted RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 NFIXQ14938 502 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 LAPTM4AQ15012 233 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 RPS6KA2Q15349 733 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 NTRK2Q16620 822 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 STXBP5Q5T5C0 1151 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 CES4AQ5XG92 561 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 USP17L6PQ6QN14 398 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 NLGN4XQ8N0W4 816 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 ANKRD53Q8N9V6 530 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 RFWD2Q8NHY2 731 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 PRPF31Q8WWY3 499 aaKnown RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 CEP295NLQ96MC4 621 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 ABCG8Q9H221 673 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 SEMA4BQ9NPR2 832 aaPredicted RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 GLRX2Q9NS18 164 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 BTG4Q9NY30 223 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 FRRS1LQ9P0K9 344 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 SLC25A10Q9UBX3 287 aaPredicted RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 RPH3AQ9Y2J0 694 aaPredicted RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 TELO2Q9Y4R8 837 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 NOS1P29475 1434 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 RIMS2Q9UQ26 1411 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 CASZ1Q86V15 1759 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 TMEM131LA2VDJ0 1609 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 FRMD3A2A2Y4 597 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 OR6C76A6NM76 312 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 H0YHG0 523 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 H3BM21 787 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 TSPAN4O14817 238 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 UPP2O95045 317 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 PRLP01236 227 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 VAV1P15498 845 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 PTPN1P18031 435 aaKnown RBP7.07□□□□□ -1.28
SMCO1-201ENST00000397537 SAT1P21673 171 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 KLRC1P26715 233 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 LMAN1P49257 510 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 TUBB2AQ13885 445 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 GRM4Q14833 912 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 RTP2Q5QGT7 225 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 HP1BP3Q5SSJ5 553 aaPredicted RBP7.07□□□□□ -1.28
SMCO1-201ENST00000397537 DCAF12L1Q5VU92 463 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 OTUD7BQ6GQQ9 843 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 PM20D1Q6GTS8 502 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 TTI2Q6NXR4 508 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 CHST9Q7L1S5 443 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 RBM12BQ8IXT5 1001 aaKnown RBP7.07□□□□□ -1.28
SMCO1-201ENST00000397537 SIX6OS1Q8N1H7 587 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 NLGN2Q8NFZ4 835 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 DUSP19Q8WTR2 217 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 GAB3Q8WWW8 586 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 ASB15Q8WXK1 588 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 CASP10Q92851 521 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 RAB7BQ96AH8 199 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 TMX3Q96JJ7 454 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 SH3GL2Q99962 352 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 FAM118BQ9BPY3 351 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 TUBB2BQ9BVA1 445 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMCO1-201ENST00000397537 ARHGEF3Q9NR81 526 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 PKD2L1Q9P0L9 805 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 SH3BP4Q9P0V3 963 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 LIMA1Q9UHB6 759 aaKnown RBP7.07□□□□□ -1.28
SMCO1-201ENST00000397537 SARDHQ9UL12 918 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 ATXN7L1Q9ULK2 861 aaPredicted RBP7.07□□□□□ -1.28
SMCO1-201ENST00000397537 WDR37Q9Y2I8 494 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 CLCA3PQ9Y6N3 262 aa7.07□□□□□ -1.28
SMCO1-201ENST00000397537 CASKIN1Q8WXD9 1431 aa7.06□□□□□ -1.28
SMCO1-201ENST00000397537 TRBV23OR9-2A0A075B6M9 112 aa7.06□□□□□ -1.28
SMCO1-201ENST00000397537 MBD3L4A6NDZ8 208 aaPredicted RBP7.06□□□□□ -1.28
SMCO1-201ENST00000397537 MBD3L3A6NE82 208 aaPredicted RBP7.06□□□□□ -1.28
SMCO1-201ENST00000397537 TNFRSF10AO00220 468 aa7.06□□□□□ -1.28
SMCO1-201ENST00000397537 IGF2BP3O00425 579 aaKnown RBP eCLIP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms