RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CNTNAP2Q9UHC6 1331 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 GOLGA8TH3BQL2 631 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 GPR25O00155 361 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 CES2O00748 559 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TOMM70O94826 608 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 PSMC3P17980 439 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 PMLP29590 882 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 GJA5P36382 358 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TUFMP49411 452 aaKnown RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 HPCAP84074 193 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 FMO1Q01740 532 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 GPS1Q13098 491 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 SNX17Q15036 470 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 RASA2Q15283 850 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 SLC45A4Q5BKX6 768 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 SPDYCQ5MJ68 293 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ZBTB41Q5SVQ8 909 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TAPT1Q6NXT6 567 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 NT5DC3Q86UY8 548 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 CLVS1Q8IUQ0 354 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 ZC3H3Q8IXZ2 948 aaKnown RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 ZSWIM2Q8NEG5 633 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 HELQQ8TDG4 1101 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 PYDC1Q8WXC3 89 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 GAD1Q99259 594 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 PCYT2Q99447 389 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 SHCBP1LQ9BZQ2 653 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 KLC2Q9H0B6 622 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 NEUROG2Q9H2A3 272 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 SLCO1B3Q9NPD5 702 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 CHST12Q9NRB3 414 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TRNAU1APQ9NX07 287 aaKnown RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 DAPK2Q9UIK4 370 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 RABGEF1Q9UJ41 708 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TSPAN16Q9UKR8 245 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ARHGAP26Q9UNA1 814 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 DERAQ9Y315 318 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 COQ4Q9Y3A0 265 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 COMMD10Q9Y6G5 202 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 UMODL1Q5DID0 1318 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 RNF103-CHMP3A0A140T963 221 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 LOC100653049A0A140TA62 436 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TYW5A2RUC4 315 aaKnown RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 CASTOR2A6NHX0 329 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 GOLGA8MH3BSY2 632 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 MGEA5O60502 916 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TRMUO75648 421 aaKnown RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 KRT34O76011 436 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 MICAL2O94851 1124 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 CST3P01034 146 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 POMCP01189 267 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 MYL2P10916 166 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 RALAP11233 206 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ITGA8P53708 1063 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ATXN3P54252 364 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 ATN1P54259 1190 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 ARL4CP56559 192 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 MAP3K7CLP57077 242 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 JAM2P57087 298 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 EIF3EP60228 445 aaKnown RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 ROR1Q01973 937 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 CENPCQ03188 943 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 BST2Q10589 180 aaKnown RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 TARBP2Q15633 366 aaKnown RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 KCNA10Q16322 511 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 DCAF6Q58WW2 860 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 C1QTNF12Q5T7M4 302 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 MAMDC4Q6UXC1 1216 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 SAPCD2Q86UD0 394 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 UNC93AQ86WB7 457 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 HEATR4Q86WZ0 1026 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 CD99L2Q8TCZ2 262 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 CAPSLQ8WWF8 208 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TLCD1Q96CP7 247 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 HSPBAP1Q96EW2 488 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 KCNK16Q96T55 309 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 RNF208Q9H0X6 261 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 PDZD7Q9H5P4 517 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 KIAA1551Q9HCM1 1747 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.85□□□□□ -1.47
RFFL-202ENST00000394597 ARMCX1Q9P291 453 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 SEPT3Q9UH03 358 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 STARD13Q9Y3M8 1113 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ANKRD31Q8N7Z5 1873 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 DNAJC25-GNG10A0A024R161 153 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 C1orf232A0A0U1RR37 186 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TRIM64CA6NLI5 447 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 BOLA2-SMG1P6H3BVE0 249 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ZNF263O14978 683 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TSPAN1O60635 241 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 TSPAN9O75954 239 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ASGR1P07306 291 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 COILP38432 576 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 CDKL3Q8IVW4 592 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 ARID3BQ8IVW6 561 aaPredicted RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 PHC3Q8NDX5 983 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 CDKL2Q92772 493 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 OMA1Q96E52 524 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 FBXL18Q96ME1 805 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 CNPY3Q9BT09 278 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms