RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 VPS28Q9UK41 221 aa2.4□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZMYND8Q9ULU4 1186 aaPredicted RBP2.4□□□□□ -2.03
SNORA40.19-201ENST00000390846 HSF4Q9ULV5 492 aa2.4□□□□□ -2.03
SNORA40.19-201ENST00000390846 ARHGAP26Q9UNA1 814 aa2.4□□□□□ -2.03
SNORA40.19-201ENST00000390846 GTPBP10A4D1E9 387 aaKnown RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CCDC151A5D8V7 595 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TRIM64A6NGJ6 449 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TRIM64BA6NI03 449 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 FAM90A20PA6NIJ5 464 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 E7ENX8 843 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 HNRNPDLO14979 420 aaKnown RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TEX33O43247 280 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 ADAM20O43506 726 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 SGTAO43765 313 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 ACTL6BO94805 426 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TGDSO95455 350 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TK1P04183 234 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 PDHA1P08559 390 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CNPP09543 421 aaKnown RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 XBP1P17861 261 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CALRP27797 417 aaKnown RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 MPGP29372 298 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TM4SF1P30408 202 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 ICAM3P32942 547 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CIITAP33076 1130 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 GGT5P36269 586 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 MLH1P40692 756 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CD86P42081 329 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CARSP49589 748 aaKnown RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CCR9P51686 369 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 SNX16P57768 344 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 YBEYP58557 167 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 MXRA7P84157 204 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CDC42EP1Q00587 391 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CREB5Q02930 508 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 PPARDQ03181 441 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TAP2Q03519 686 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TDGQ13569 410 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CUL4AQ13619 759 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 SCARB2Q14108 478 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 GRM4Q14833 912 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 DAZAP2Q15038 168 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TBCEQ15813 527 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 BTBD16Q32M84 506 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 MMEL1Q495T6 779 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLC44A4Q53GD3 710 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 RILPL1Q5EBL4 403 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 MFSD4BQ5TF39 518 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 DCAF12L1Q5VU92 463 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 FCRL6Q6DN72 434 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TTLL5Q6EMB2 1281 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 MTFR2Q6P444 385 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 NFRKBQ6P4R8 1299 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 FOXR2Q6PJQ5 311 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 ZNF365Q70YC5 407 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 PPP1R32Q7Z5V6 425 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 KCTD20Q7Z5Y7 419 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 ANKS1BQ7Z6G8 1248 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TECPR1Q7Z6L1 1165 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 PXKQ7Z7A4 578 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CLNKQ7Z7G1 428 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 VSIG1Q86XK7 387 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 SLC44A2Q8IWA5 706 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 SCML4Q8N228 414 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 ARL10Q8N8L6 244 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 FANCBQ8NB91 859 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CEP70Q8NHQ1 597 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 GOT1L1Q8NHS2 421 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 KBTBD7Q8WVZ9 684 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 NCSTNQ92542 709 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 RUBCNQ92622 972 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 ATP6V1E2Q96A05 226 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 RNF125Q96EQ8 232 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TMX3Q96JJ7 454 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 PBKQ96KB5 322 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CAMK1GQ96NX5 476 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 YME1L1Q96TA2 773 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 PRPF18Q99633 342 aaKnown RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 C7orf25Q9BPX7 421 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 ADI1Q9BV57 179 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TINAGL1Q9GZM7 467 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 PCDHAC1Q9H158 963 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 VPS16Q9H269 839 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CCDC68Q9H2F9 335 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TTYH1Q9H313 450 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 NDST4Q9H3R1 872 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 ST6GALNAC4Q9H4F1 302 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TAF1DQ9H5J8 278 aaPredicted RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 RMI1Q9H9A7 625 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CHODLQ9H9P2 273 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 NECTIN3Q9NQS3 549 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TLR8Q9NR97 1041 aaKnown RBP2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 PCDHB16Q9NRJ7 776 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 TDP1Q9NUW8 608 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 MID2Q9UJV3 735 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 KCND3Q9UK17 655 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 RPS6KA6Q9UK32 745 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 CDYLQ9Y232 598 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 RCE1Q9Y256 329 aa2.39□□□□□ -2.03
SNORA40.19-201ENST00000390846 DNAJC16Q9Y2G8 782 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms