RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 WSCD1Q658N2 575 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 SPOCD1Q6ZMY3 1216 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 B3GALNT2Q8NCR0 500 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 KCTD13Q8WZ19 329 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 TFAP2BQ92481 460 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 NCAPGQ9BPX3 1015 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 FAM118BQ9BPY3 351 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 LMAN2LQ9H0V9 348 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ZBP1Q9H171 429 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 PARVAQ9NVD7 372 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ANAPC5Q9UJX4 755 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 EFR3BQ9Y2G0 817 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 GREB1Q4ZG55 1949 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 TMEM265A0A087WTH1 108 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 SMIM23A6NLE4 172 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 DXOO77932 396 aaKnown RBP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ETS1P14921 441 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 SYN1P17600 705 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 MAGEA4P43358 317 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 RAP1GAPP47736 663 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 SMAD3P84022 425 aaKnown RBP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 YWHAHQ04917 246 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 MORF4L2Q15014 288 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 TRIP13Q15645 432 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 RAB30Q15771 203 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 CTC1Q2NKJ3 1217 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 RCOR2Q8IZ40 523 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 AGGF1Q8N302 714 aaeCLIP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 CCDC89Q8N998 374 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 NAT8LQ8N9F0 302 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ZNF511Q8NB15 262 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 BBOF1Q8ND07 529 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 CCDC114Q96M63 670 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 PLAC1Q9HBJ0 212 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 MRPL47Q9HD33 250 aaKnown RBP8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ADAM22Q9P0K1 906 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 HMGXB4Q9UGU5 601 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 ASIC3Q9UHC3 531 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 IP6K2Q9UHH9 426 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 STARD13Q9Y3M8 1113 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 PCDHB12Q9Y5F1 795 aa8.01□□□□□ -1.13
CDKL5-202ENST00000379996 KIAA0100Q14667 2235 aaKnown RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 GOLGA6L7A0A1B0GV03 622 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 A0A1W2PRU2 124 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 GAS8O95995 478 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 ZSCAN5DPP0CG00 497 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 NQO1P15559 274 aaKnown RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 PECAM1P16284 738 aaPredicted RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 PTPN1P18031 435 aaKnown RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 IL1R2P27930 398 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 ATP5DP30049 168 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 BMPR1AP36894 532 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 VCPP55072 806 aaKnown RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 CDH8P55286 799 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 LLGL1Q15334 1064 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 SWI5Q1ZZU3 235 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 P3H1Q32P28 736 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 OVOS1Q6IE37 1185 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 ZNF280DQ6N043 979 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 SPATA21Q7Z572 469 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 PHLDB2Q86SQ0 1253 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 PASD1Q8IV76 773 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 ANKRD52Q8NB46 1076 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 TTPALQ9BTX7 342 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 HEMGNQ9BXL5 484 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 NOD2Q9HC29 1040 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 DDX43Q9NXZ2 648 aaKnown RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 SHOC2Q9UQ13 582 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 HSFX4A0A1B0GTS1 333 aaPredicted RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 HSFX3A0A1B0GWH4 333 aaPredicted RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 LINC01553A4QN01 128 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 A8MXQ7 604 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 F8VP50 259 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 T-ENOLP0DO92 83 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 BRAFP15056 766 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 IGFBP6P24592 240 aaPredicted RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 BRCC3P46736 316 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 IFNAR2P48551 515 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 GDF10P55107 478 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 GAD2Q05329 585 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 SHHQ15465 462 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 MSS51Q4VC12 460 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 ZDHHC17Q8IUH5 632 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 CCDC50Q8IVM0 306 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 DCP1BQ8IZD4 617 aaKnown RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 FNIP1Q8TF40 1166 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 C10orf82Q8WW14 230 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 SYT15Q9BQS2 421 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 GPR62Q9BZJ7 368 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 MIS12Q9H081 205 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 PCDH9Q9HC56 1237 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 CRTAC1Q9NQ79 661 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 ARL2BPQ9Y2Y0 163 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8□□□□□ -1.13
CDKL5-202ENST00000379996 WFS1O76024 890 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 KRT16P08779 473 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 CTSAP10619 480 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 KRT10P13645 584 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 TKTP29401 623 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms