RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CLCN6P51797 869 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 BCL2L1Q07817 233 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 RBBP5Q15291 538 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 NPNTQ6UXI9 565 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 IRF2BP2Q7Z5L9 587 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 SLC22A17Q8WUG5 538 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 TWNKQ96RR1 684 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 YIPF2Q9BWQ6 316 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 MIOSQ9NXC5 875 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 CACNA1SQ13698 1873 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 PITPNM1O00562 1244 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 TRIM16O95361 564 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 ESRRBO95718 433 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 ITGB6P18564 788 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 CARSP49589 748 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 SMARCB1Q12824 385 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 MAP3K21Q5TCX8 1036 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 FAM47EQ6ZV65 393 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 MARK2Q7KZI7 788 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 PTAR1Q7Z6K3 402 aaPredicted RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 TMEM130Q8N3G9 435 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 EMID1Q96A84 441 aaPredicted RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 IGSF21Q96ID5 467 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 ELMO2Q96JJ3 720 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 N4BP2Q86UW6 1770 aaPredicted RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 TNRC6CQ9HCJ0 1690 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 ZDBF2Q9HCK1 2354 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 C9IYK1 514 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 H3BQ06 376 aaPredicted RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 PSMD3O43242 534 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 VNN1O95497 513 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 C1RP00736 705 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 TAC1P20366 129 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 GPR15P49685 360 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 SFSWAPQ12872 951 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 RCN2Q14257 317 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 ACOX1Q15067 660 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 KLHL38Q2WGJ6 581 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 CES3Q6UWW8 571 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 DQX1Q8TE96 717 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 CLEC4CQ8WTT0 213 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 USP13Q92995 863 aaPredicted RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 FOPNLQ96NB1 174 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 KLHL5Q96PQ7 755 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 CYP2S1Q96SQ9 504 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 CYTH2Q99418 400 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 NFKBIZQ9BYH8 718 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 PRDM12Q9H4Q4 367 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 MAN1C1Q9NR34 630 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 SLC39A10Q9ULF5 831 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 NCKAP1Q9Y2A7 1128 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 AAR2Q9Y312 384 aaKnown RBP8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 YIPF1Q9Y548 306 aa8.7□□□□□ -1.02
CRNKL1-202ENST00000377340 A0A087WUV0 522 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 GOLGA8KD6RF30 607 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 GOLGA8TH3BQL2 631 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 RNF103O00237 685 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 HSPA4LO95757 839 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 RBL1P28749 1068 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 PRKCIP41743 596 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 MARCKSL1P49006 195 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 GEMIN4P57678 1058 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 VSNL1P62760 191 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 OCRLQ01968 901 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 MMEL1Q495T6 779 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 ANGPTL8Q6UXH0 198 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 LINGO4Q6UY18 593 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 DSG4Q86SJ6 1040 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 STAMBPL1Q96FJ0 436 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 RPL10LQ96L21 214 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 ERP44Q9BS26 406 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 ADGRE3Q9BY15 652 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 ZYG11BQ9C0D3 744 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 ADAMTS10Q9H324 1103 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 ERVK-5Q9HDB9 667 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 AVENQ9NQS1 362 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 KLHL14Q9P2G3 628 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 CPSF2Q9P2I0 782 aaKnown RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 IGSF6O95976 241 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 KITP10721 976 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 ITIH2P19823 946 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 TYMPP19971 482 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 RFC2P35250 354 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 COPS2P61201 443 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 SOX4Q06945 474 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 MROH9Q5TGP6 573 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 CIR1Q86X95 450 aaPredicted RBP8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 HTR3CQ8WXA8 447 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 MCUR1Q96AQ8 359 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 TIFAQ96CG3 184 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 SUSD3Q96L08 255 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 TSPAN18Q96SJ8 248 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 SLC9A7Q96T83 725 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 SLC38A8A6NNN8 435 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 TULP2O00295 520 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 ADAMTS4O75173 837 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 GPR32O75388 356 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 BRAFP15056 766 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 MMP8P22894 467 aa8.69□□□□□ -1.02
CRNKL1-202ENST00000377340 MMP13P45452 471 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms