RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ALDOAP04075 364 aaKnown RBP14.98□□□□□ -0.01
MSH5-201ENST00000375703 CCDC130P13994 396 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 KCNA4P22459 653 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 MGAT1P26572 445 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 ERFP50548 548 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 PDE1BQ01064 536 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 GRIK3Q13003 919 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 PDE1CQ14123 709 aaPredicted RBP14.98□□□□□ -0.01
MSH5-201ENST00000375703 TEDDM1Q5T9Z0 273 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 BSPRYQ5W0U4 402 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 MBLAC2Q68D91 279 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 HACE1Q8IYU2 909 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 SIKE1Q9BRV8 207 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 KRT82Q9NSB4 513 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.98□□□□□ -0.01
MSH5-201ENST00000375703 TUBGCP4Q9UGJ1 667 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 SLC7A8Q9UHI5 535 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 EMCNQ9ULC0 261 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 APOBEC2Q9Y235 224 aaKnown RBP14.98□□□□□ -0.01
MSH5-201ENST00000375703 C6orf222P0C671 652 aaPredicted RBP14.98□□□□□ -0.01
MSH5-201ENST00000375703 CYP2C8P10632 490 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 FGF3P11487 239 aaPredicted RBP14.98□□□□□ -0.01
MSH5-201ENST00000375703 ACTR3P61158 418 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 NIPAL4Q0D2K0 466 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 C1orf146Q5VVC0 180 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 BEST2Q8NFU1 509 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 C18orf25Q96B23 403 aaPredicted RBP14.98□□□□□ -0.01
MSH5-201ENST00000375703 RNF19AQ9NV58 838 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 GINS2Q9Y248 185 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 DERAQ9Y315 318 aa14.98□□□□□ -0.01
MSH5-201ENST00000375703 PTPRFP10586 1907 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 SPDYE5A6NIY4 337 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 PLIN3O60664 434 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 ANPEPP15144 967 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 AOC1P19801 751 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 BCAT1P54687 386 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 AP2B1P63010 937 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 TAPT1Q6NXT6 567 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 FAM131BQ86XD5 332 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 MYLK4Q86YV6 388 aaPredicted RBP14.97□□□□□ -0.01
MSH5-201ENST00000375703 CCNJLQ8IV13 435 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 NETO2Q8NC67 525 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 ARNTL2Q8WYA1 636 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 DCPSQ96C86 337 aaKnown RBP14.97□□□□□ -0.01
MSH5-201ENST00000375703 ZNF778Q96MU6 729 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 OLFM3Q96PB7 478 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 ZNF184Q99676 751 aaPredicted RBP14.97□□□□□ -0.01
MSH5-201ENST00000375703 CCDC189A1A4V9 331 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 H3BRB1 525 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 STK10O94804 968 aaKnown RBP14.97□□□□□ -0.01
MSH5-201ENST00000375703 GNL1P36915 607 aaPredicted RBP14.97□□□□□ -0.01
MSH5-201ENST00000375703 ZBTB6Q15916 424 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 DCAF4L1Q3SXM0 396 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 GLRA4Q5JXX5 417 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 POTEAQ6S8J7 498 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 STRADAQ7RTN6 431 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 SULF1Q8IWU6 871 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 LRRC52Q8N7C0 313 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 C16orf70Q9BSU1 422 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 TUT1Q9H6E5 874 aaKnown RBP14.97□□□□□ -0.01
MSH5-201ENST00000375703 SCOCQ9UIL1 159 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 SOX13Q9UN79 622 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 USP3Q9Y6I4 520 aa14.97□□□□□ -0.01
MSH5-201ENST00000375703 POLR2AP24928 1970 aaKnown RBP14.97□□□□□ -0.01
MSH5-201ENST00000375703 COL1A2P08123 1366 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 KLHL2O95198 593 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 BAG2O95816 211 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 ITGA2BP08514 1039 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 PGAM1P18669 254 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 SP100P23497 879 aaPredicted RBP14.96□□□□□ -0.01
MSH5-201ENST00000375703 LMO2P25791 158 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 SCNN1AP37088 669 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 ACADSBP45954 432 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 TUBB3Q13509 450 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 KIZQ2M2Z5 673 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 APLFQ8IW19 511 aaPredicted RBP14.96□□□□□ -0.01
MSH5-201ENST00000375703 CCNYQ8ND76 341 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 PPTC7Q8NI37 304 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 PPP4R1Q8TF05 950 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 P2RY11Q96G91 374 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 TTC1Q99614 292 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 FERMT1Q9BQL6 677 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 CEP41Q9BYV8 373 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 SEPT10Q9P0V9 454 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 FZD10Q9ULW2 581 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 HES2Q9Y543 173 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 PSAT1Q9Y617 370 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 RNF103O00237 685 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 SMAD1Q15797 465 aaKnown RBP14.96□□□□□ -0.01
MSH5-201ENST00000375703 C10orf107Q8IVU9 208 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 KBTBD2Q8IY47 623 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 SNX27Q96L92 541 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 STN1Q9H668 368 aaKnown RBP14.96□□□□□ -0.01
MSH5-201ENST00000375703 TXNDC16Q9P2K2 825 aa14.96□□□□□ -0.01
MSH5-201ENST00000375703 ARHGAP42A6NI28 874 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 MEI4A8MW99 385 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 MFSD11O43934 449 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 OPHN1O60890 802 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 SERPINE1P05121 402 aa14.95□□□□□ -0.02
MSH5-201ENST00000375703 TYK2P29597 1187 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms