RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 RBM17Q96I25 401 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 HEXIM2Q96MH2 286 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 RBMX2Q9Y388 322 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 IFNA10P01566 189 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 IFNA4P05014 189 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 PTX3P26022 381 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 RBM4BQ9BQ04 359 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 RBM4Q9BWF3 364 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 SEMA4AQ9H3S1 761 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 BRD9Q9H8M2 597 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 LRRC4Q9HBW1 653 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 DMGDHQ9UI17 866 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 FIS1Q9Y3D6 152 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 PI4K2BG5E9Z4 385 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 CEBPGP53567 150 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 SHC4Q6S5L8 630 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 ZSWIM3Q96MP5 696 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 MMP27Q9H306 513 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 BIN3Q9NQY0 253 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 RPS6KA6Q9UK32 745 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 RAB19A4D1S5 217 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 SPDYE2BA6NHP3 402 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 DHX15O43143 795 aaKnown RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 SPDYE6P0CI01 402 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 HALP42357 657 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 CNTN1Q12860 1018 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 STILQ15468 1287 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 TTMPQ5BVD1 217 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 RYBPQ8N488 228 aaPredicted RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 BTN2A2Q8WVV5 523 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 C18orf8Q96DM3 657 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 TLL2Q9Y6L7 1015 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 CLCA1A8K7I4 914 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 K7ENM7 598 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 PRMT5O14744 637 aaPredicted RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 PABPC4Q13310 644 aaKnown RBP eCLIP6.76□□□□□ -1.338e-9■■■□□ 15.7
UBR4-204ENST00000375254 PTPROQ16827 1216 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 FAM13CQ8NE31 585 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 ITFG1Q8TB96 612 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 GATAD2BQ8WXI9 593 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 C18orf25Q96B23 403 aaPredicted RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 FAM53CQ9NYF3 392 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 DEFA5Q01523 94 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 MLECQ14165 292 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 STXBP2Q15833 593 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 OSBP2Q969R2 916 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 ART5Q96L15 291 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 PPP3CCP48454 512 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 DYNLT1P63172 113 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 MVKQ03426 396 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 EMC10Q5UCC4 262 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 CMTR2Q8IYT2 770 aaKnown RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 ZNF540Q8NDQ6 660 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 CRELD1Q96HD1 420 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 VPS35Q96QK1 796 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 TASP1Q9H6P5 420 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 MGAT4AQ9UM21 535 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 RPS6KA4O75676 772 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 AP2S1P53680 142 aaPredicted RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 ZCCHC8Q6NZY4 707 aaKnown RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 DENND1BQ6P3S1 775 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 IFNEQ86WN2 208 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 PPP1R10Q96QC0 940 aaKnown RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 LNPEPQ9UIQ6 1025 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 NAGPAQ9UK23 515 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 ANKRD33BA6NCL7 494 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 SNAP29O95721 258 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 COMTP21964 271 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 FXR1P51114 621 aaKnown RBP eCLIP6.76□□□□□ -1.336e-7■■■■□ 19.8
UBR4-204ENST00000375254 GPC3P51654 580 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 TBC1D19Q8N5T2 526 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 TMEM138Q9NPI0 162 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 TRMT13Q9NUP7 481 aaKnown RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 AKT1P31749 480 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 DEFA6Q01524 100 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 RELAQ04206 551 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 C1orf189Q5VU69 101 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 EEF2KMTQ96G04 330 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 HSPBP1Q9NZL4 362 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 CFL2Q9Y281 166 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 GRIP1Q9Y3R0 1128 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 MFHAS1Q9Y4C4 1052 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 PSMD12O00232 456 aaPredicted RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 TRMT1LQ7Z2T5 733 aaKnown RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 ENDOVQ8N8Q3 282 aaKnown RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 PPA2Q9H2U2 334 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 WDR41Q9HAD4 459 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 MARCOQ9UEW3 520 aaPredicted RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 B3GNT3Q9Y2A9 372 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 A0A1B0GVC2 190 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 FAM196BA6NMK8 535 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 KLHDC10Q6PID8 442 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 SPATA6LQ8N4H0 392 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 CNTD1Q8N815 330 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 RAB23Q9ULC3 237 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 MTF2Q9Y483 593 aaPredicted RBP6.76□□□□□ -1.33
UBR4-204ENST00000375254 MLNP12872 115 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 RGS6P49758 472 aa6.76□□□□□ -1.33
UBR4-204ENST00000375254 ALDH3A2P51648 485 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms