RNA–Protein interactions for RNA: ENST00000375147.7

NCBP1-202, Transcript of nuclear cap binding protein subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCBP1, Length 5,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-202ENST00000375147 ICE2Q659A1 982 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 ZNF470Q6ECI4 717 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 LLGL2Q6P1M3 1020 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 TCP10LQ8TDR4 215 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 SYNDIG1Q9H7V2 258 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 ARHGAP28Q9P2N2 729 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 C5orf58C9J3I9 102 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 CLDN5O00501 218 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 GRK2P25098 689 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 BRCC3P46736 316 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 NUDT2P50583 147 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 ITGA9Q13797 1035 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 PKN2Q16513 984 aaKnown RBP13.47□□□□□ -0.25
NCBP1-202ENST00000375147 ANKS3Q6ZW76 656 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 KCNMB4Q86W47 210 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 MYO1HQ8N1T3 1032 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 TEKT4Q8WW24 435 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 PHF21BQ96EK2 531 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 PNMA8BQ9ULN7 279 aaPredicted RBP13.47□□□□□ -0.25
NCBP1-202ENST00000375147 SEC24DO94855 1032 aaPredicted RBP13.47□□□□□ -0.25
NCBP1-202ENST00000375147 CKBP12277 381 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 PPP1R26Q5T8A7 1209 aaPredicted RBP13.47□□□□□ -0.25
NCBP1-202ENST00000375147 AENQ8WTP8 325 aaKnown RBP13.47□□□□□ -0.25
NCBP1-202ENST00000375147 C18orf25Q96B23 403 aaPredicted RBP13.47□□□□□ -0.25
NCBP1-202ENST00000375147 RNF157Q96PX1 679 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 VAT1Q99536 393 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 PRDM12Q9H4Q4 367 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 GDF3Q9NR23 364 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 STX18Q9P2W9 335 aaKnown RBP13.47□□□□□ -0.25
NCBP1-202ENST00000375147 HAO1Q9UJM8 370 aa13.47□□□□□ -0.25
NCBP1-202ENST00000375147 REXO2Q9Y3B8 237 aaKnown RBP13.47□□□□□ -0.25
NCBP1-202ENST00000375147 TREHO43280 583 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 MMRN1Q13201 1228 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 CYTH1Q15438 398 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 SEL1L3Q68CR1 1132 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 ALG3Q92685 438 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 ARHGAP26Q9UNA1 814 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 FAM32AQ9Y421 112 aaKnown RBP13.46□□□□□ -0.25
NCBP1-202ENST00000375147 SOWAHBA6NEL2 793 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 EVPLLA8MZ36 301 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 NT5C1B-RDH14C9J2C7 533 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 ZNF333Q96JL9 665 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 HACD1B0YJ81 288 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 OPLAHO14841 1288 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 RNASEH1O60930 286 aaKnown RBP13.46□□□□□ -0.25
NCBP1-202ENST00000375147 SASH3O75995 380 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 TOMM70O94826 608 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 NPY2RP49146 381 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 N4BP2L1Q5TBK1 243 aaPredicted RBP13.46□□□□□ -0.25
NCBP1-202ENST00000375147 C16orf59Q7L2K0 433 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 USP6NLQ92738 828 aa13.46□□□□□ -0.25
NCBP1-202ENST00000375147 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.252e-6■■■■■ 106
NCBP1-202ENST00000375147 TPST1O60507 370 aa13.46□□□□□ -0.26
NCBP1-202ENST00000375147 B4GALT4O60513 344 aa13.46□□□□□ -0.26
NCBP1-202ENST00000375147 MMP3P08254 477 aa13.46□□□□□ -0.26
NCBP1-202ENST00000375147 SERPINB5P36952 375 aa13.46□□□□□ -0.26
NCBP1-202ENST00000375147 SLC45A4Q5BKX6 768 aa13.46□□□□□ -0.26
NCBP1-202ENST00000375147 SDHAF4Q5VUM1 108 aa13.46□□□□□ -0.26
NCBP1-202ENST00000375147 ANKRD23Q86SG2 305 aa13.46□□□□□ -0.26
NCBP1-202ENST00000375147 THUMPD3Q9BV44 507 aaKnown RBP13.46□□□□□ -0.26
NCBP1-202ENST00000375147 SPATA16Q9BXB7 569 aa13.46□□□□□ -0.26
NCBP1-202ENST00000375147 PRKD2Q9BZL6 878 aa13.46□□□□□ -0.26
NCBP1-202ENST00000375147 V9GYQ6 96 aa13.46□□□□□ -0.26
NCBP1-202ENST00000375147 A0A096LPK6 155 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 SMIM28A0A1B0GU29 152 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 SMIM35A0A1B0GVV1 85 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 ADAMTS3O15072 1205 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 ITGB6P18564 788 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 RPL9P32969 192 aaKnown RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 ATP6V1E1P36543 226 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 FAAP100Q0VG06 881 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 ITGA7Q13683 1181 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 HIST2H2ACQ16777 129 aaPredicted RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 SPRYD7Q5W111 196 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 HIST2H2AA3Q6FI13 130 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 C11orf96Q7Z7L8 435 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 ZFP42Q96MM3 310 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 PRPF18Q99633 342 aaKnown RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 SLC27A5Q9Y2P5 690 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 ARL4DP49703 201 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 PABPC1LQ4VXU2 614 aaKnown RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 NAF1Q96HR8 494 aaKnown RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 ZNF558Q96NG5 402 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 DEFB118Q96PH6 123 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 ECSITQ9BQ95 431 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 TEX12Q9BXU0 123 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 UBA2Q9UBT2 640 aaPredicted RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 IPPQ9Y573 584 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 TM9SF1O15321 606 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 PBLDP30039 288 aaPredicted RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 ZNF135P52742 658 aaPredicted RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 TAS2R40P59535 323 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 KCTD19Q17RG1 926 aaPredicted RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 RAP1GAP2Q684P5 730 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 TPGS1Q6ZTW0 290 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 MTDHQ86UE4 582 aaKnown RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 CLEC4FQ8N1N0 589 aa13.45□□□□□ -0.26
NCBP1-202ENST00000375147 ZCCHC9Q8N567 271 aaKnown RBP13.45□□□□□ -0.26
NCBP1-202ENST00000375147 PCDHB18PQ96TA0 734 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 241 ms