RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 B3GNT5Q9BYG0 378 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 C20orf27Q9GZN8 174 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 ZNF395Q9H8N7 513 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 XPNPEP3Q9NQH7 507 aa11.75□□□□□ -0.53
PTPN20-204ENST00000374346 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTPN20-204ENST00000374346 CCDC189A1A4V9 331 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 CAPN15O75808 1086 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 BAG2O95816 211 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 TYK2P29597 1187 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 IREB2P48200 963 aaKnown RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 NIPAL4Q0D2K0 466 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 UBAP2LQ14157 1087 aaKnown RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 CCDC153Q494R4 210 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 TMCO4Q5TGY1 634 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 NAIF1Q69YI7 327 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 NCBP2-AS2Q69YL0 99 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 TRAPPC9Q96Q05 1148 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 LBHD1Q9BQE6 289 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 EBF4Q9BQW3 602 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 C11orf84Q9BUA3 381 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 DNAJC28Q9NX36 388 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 WASF2Q9Y6W5 498 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 SCN1AP35498 2009 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 CXCL11O14625 94 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 PLIN3O60664 434 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 CNMDO75829 334 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 DGKIO75912 1065 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 ALDOAP04075 364 aaKnown RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 ITGA2BP08514 1039 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 LCP1P13796 627 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 GRIA1P42261 906 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 CDK7P50613 346 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 SESN2P58004 480 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 RPL10AP62906 217 aaKnown RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 PDE1CQ14123 709 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 PDK1Q15118 436 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 CES4AQ5XG92 561 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 SLC30A9Q6PML9 568 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 ZNF410Q86VK4 478 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 LINC01465Q8N7H1 131 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 ZNF483Q8TF39 744 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 UCMAQ8WVF2 138 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 JADE3Q92613 823 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 OTUD5Q96G74 571 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 OLFM3Q96PB7 478 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 KCTD15Q96SI1 283 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 TTC1Q99614 292 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 TRIM56Q9BRZ2 755 aaKnown RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 KRT82Q9NSB4 513 aa11.74□□□□□ -0.53
PTPN20-204ENST00000374346 DDX43Q9NXZ2 648 aaKnown RBP11.74□□□□□ -0.53
PTPN20-204ENST00000374346 FGF3P11487 239 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-204ENST00000374346 GOT1P17174 413 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 KCNA4P22459 653 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 CACNA2D1P54289 1103 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 FSCBQ5H9T9 825 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 FAM182AQ5T1J6 154 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 GRTP1Q5TC63 336 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 MTHFD1LQ6UB35 978 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 IZUMO2Q6UXV1 221 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 ADGRG6Q86SQ4 1221 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 RASSF3Q86WH2 238 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 FBXO27Q8NI29 283 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 CNKSR2Q8WXI2 1034 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 HSFY1Q96LI6 401 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 CPNE1Q99829 537 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 FAM192AQ9GZU8 254 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 MTMR10Q9NXD2 777 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 RALGAPA2Q2PPJ7 1873 aa11.73□□□□□ -0.53
PTPN20-204ENST00000374346 ENO4A6NNW6 628 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 RNF103O00237 685 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 SIN3BO75182 1162 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 MGAT1P26572 445 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 CRABP2P29373 138 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 GP5P40197 560 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 MATKP42679 507 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 GLUD2P49448 558 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 DEUP1Q05D60 604 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 IFRD2Q12894 506 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-204ENST00000374346 CFAP157Q5JU67 520 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 SPANXN3Q5MJ09 141 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 TEDDM1Q5T9Z0 273 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 BSPRYQ5W0U4 402 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 C16orf46Q6P387 395 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 ERO1BQ86YB8 467 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 GPC2Q8N158 579 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 CCDC185Q8N715 623 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 GATA6Q92908 595 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 PGBD4Q96DM1 585 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 CLPTM1LQ96KA5 538 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 SH3GL3Q99963 347 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 ECSITQ9BQ95 431 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 CCDC28BQ9BUN5 200 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 PDGFCQ9NRA1 345 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 COPG2Q9UBF2 871 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 ASB3Q9Y575 518 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 CDY2AQ9Y6F7 541 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 CDY1Q9Y6F8 540 aa11.72□□□□□ -0.53
PTPN20-204ENST00000374346 SF3B1O75533 1304 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPN20-204ENST00000374346 SPDYE5A6NIY4 337 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms