RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 NPR3P17342 541 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 ACAT1P24752 427 aaKnown RBP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 NOS2P35228 1153 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 CCNG1P51959 295 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 SESN2P58004 480 aaPredicted RBP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 OCRLQ01968 901 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 MARK2Q7KZI7 788 aaKnown RBP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 ALYREFQ86V81 257 aaKnown RBP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 ARID3BQ8IVW6 561 aaPredicted RBP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 TOP6BLQ8N6T0 577 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 STKLD1Q8NE28 680 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 RAB3IL1Q8TBN0 382 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 LENG1Q96BZ8 264 aaPredicted RBP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 TSPAN18Q96SJ8 248 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 FERMT1Q9BQL6 677 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 EIF2B3Q9NR50 452 aaKnown RBP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 SLC17A6Q9P2U8 582 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 PCNTO95613 3336 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 M0QYT0 321 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 TREHO43280 583 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 TOP3BO95985 862 aaKnown RBP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 BPGMP07738 259 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 MGAT1P26572 445 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 GLUD2P49448 558 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 NIPAL4Q0D2K0 466 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 TLK2Q86UE8 772 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 PLCD3Q8N3E9 789 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 NME8Q8N427 588 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 ARRDC4Q8NCT1 418 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 CCNYQ8ND76 341 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 TTC8Q8TAM2 541 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 FBXO41Q8TF61 875 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 ZNF570Q96NI8 536 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 NPY6RQ99463 290 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 NMUR2Q9GZQ4 415 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 ZNF395Q9H8N7 513 aaPredicted RBP17.21■□□□□ 0.35
HDAC8-206ENST00000373571 LRRC4Q9HBW1 653 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 STAP1Q9ULZ2 295 aa17.21■□□□□ 0.35
HDAC8-206ENST00000373571 BIRC5O15392 142 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 GYG2O15488 501 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 GSC2O15499 205 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 ENTPD5O75356 428 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 TPBGLP0DKB5 382 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 ESRRAP11474 423 aaPredicted RBP17.2■□□□□ 0.34
HDAC8-206ENST00000373571 GNAZP19086 355 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 PSMB4P28070 264 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 NDUFV1P49821 464 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 CLNS1AP54105 237 aaKnown RBP17.2■□□□□ 0.34
HDAC8-206ENST00000373571 ADAM17P78536 824 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 NME3Q13232 169 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 PDK1Q15118 436 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 FAM110CQ1W6H9 321 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 BSPRYQ5W0U4 402 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 RFWD3Q6PCD5 774 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 RINLQ6ZS11 566 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 BNIPLQ7Z465 357 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 SIX6OS1Q8N1H7 587 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 SMG8Q8ND04 991 aaKnown RBP17.2■□□□□ 0.34
HDAC8-206ENST00000373571 SH3TC2Q8TF17 1288 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 CDKL2Q92772 493 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 NT5C3BQ969T7 300 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 PARK7Q99497 189 aaKnown RBP17.2■□□□□ 0.34
HDAC8-206ENST00000373571 SPON1Q9HCB6 807 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 GEMIN8Q9NWZ8 242 aaKnown RBP17.2■□□□□ 0.34
HDAC8-206ENST00000373571 ARMCX1Q9P291 453 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 SF3B1O75533 1304 aaKnown RBP eCLIP17.2■□□□□ 0.343e-6■■■■■ 97.8
HDAC8-206ENST00000373571 MYO18AQ92614 2054 aaKnown RBP17.2■□□□□ 0.34
HDAC8-206ENST00000373571 PPP1R12AO14974 1030 aaPredicted RBP17.2■□□□□ 0.34
HDAC8-206ENST00000373571 CAPN15O75808 1086 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 KITP10721 976 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 PTPN1P18031 435 aaKnown RBP17.2■□□□□ 0.34
HDAC8-206ENST00000373571 PGAM1P18669 254 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 PSEN2P49810 448 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 DEUP1Q05D60 604 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 CRYMQ14894 314 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 SYPL2Q5VXT5 272 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 FAM91A1Q658Y4 838 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 C4orf50Q6ZRC1 276 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 CLEC20AQ6ZU45 233 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 CRLF3Q8IUI8 442 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 ENDOVQ8N8Q3 282 aaKnown RBP17.2■□□□□ 0.34
HDAC8-206ENST00000373571 ARNTL2Q8WYA1 636 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 KCTD13Q8WZ19 329 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 MED10Q9BTT4 135 aa17.2■□□□□ 0.34
HDAC8-206ENST00000373571 MARCOQ9UEW3 520 aaPredicted RBP17.2■□□□□ 0.34
HDAC8-206ENST00000373571 TRIP12Q14669 1992 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-206ENST00000373571 UNCXA6NJT0 531 aa17.19■□□□□ 0.34
HDAC8-206ENST00000373571 EEF2KO00418 725 aaKnown RBP17.19■□□□□ 0.34
HDAC8-206ENST00000373571 SNNO75324 88 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-206ENST00000373571 IRX4P78413 519 aa17.19■□□□□ 0.34
HDAC8-206ENST00000373571 HSF5Q4G112 596 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-206ENST00000373571 PACS1Q6VY07 963 aa17.19■□□□□ 0.34
HDAC8-206ENST00000373571 KYAT3Q6YP21 454 aaKnown RBP17.19■□□□□ 0.34
HDAC8-206ENST00000373571 ZCCHC23Q6ZST2 131 aa17.19■□□□□ 0.34
HDAC8-206ENST00000373571 PAQR9Q6ZVX9 377 aa17.19■□□□□ 0.34
HDAC8-206ENST00000373571 CCNJLQ8IV13 435 aa17.19■□□□□ 0.34
HDAC8-206ENST00000373571 ZNF567Q8N184 647 aa17.19■□□□□ 0.34
HDAC8-206ENST00000373571 C20orf27Q9GZN8 174 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms