RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 MREGQ8N565 214 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 LZTR1Q8N653 840 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 MRPS31Q92665 395 aaKnown RBP11.7□□□□□ -0.54
PTPRF-203ENST00000372407 TMEM237Q96Q45 408 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 OSMRQ99650 979 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 ADGRE3Q9BY15 652 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 ELOVL6Q9H5J4 265 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 TRPM5Q9NZQ8 1165 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 AMPD1P23109 780 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 ALDH5A1P51649 535 aaPredicted RBP11.7□□□□□ -0.54
PTPRF-203ENST00000372407 CDC16Q13042 620 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 ZFP1Q6P2D0 407 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 LRRC55Q6ZSA7 311 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 YTHDF3Q7Z739 585 aaKnown RBP11.7□□□□□ -0.54
PTPRF-203ENST00000372407 KCNMB4Q86W47 210 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 CCDC103Q8IW40 242 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 CKAP2Q8WWK9 683 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 USP6NLQ92738 828 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 TMEM79Q9BSE2 394 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 ZNF446Q9NWS9 450 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 PCDHB7Q9Y5E2 793 aa11.7□□□□□ -0.54
PTPRF-203ENST00000372407 MGAT4DA6NG13 374 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 WNT10BO00744 389 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 KRT6AP02538 564 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 KRT6BP04259 564 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 PGAM1P18669 254 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 MGAT1P26572 445 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 RRM2P31350 389 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 GPC1P35052 558 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 KRT6CP48668 564 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CDK16Q00536 496 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 PWP1Q13610 501 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 ANKS6Q68DC2 871 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 ATG16L2Q8NAA4 619 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CASP10Q92851 521 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CATSPER2Q96P56 530 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CEP41Q9BYV8 373 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 SPATC1LQ9H0A9 340 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 PARVBQ9HBI1 364 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 ARMCX1Q9P291 453 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 ANKRD26Q9UPS8 1709 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 MROH7Q68CQ1 1323 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 H7C4K7 107 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 DCXO43602 365 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CNOT3O75175 753 aaKnown RBP11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CRABP2P29373 138 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 MLH1P40692 756 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CDH8P55286 799 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 PPP3CAQ08209 521 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 NBPF12Q5TAG4 269 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-203ENST00000372407 FOXR1Q6PIV2 292 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 ZNF662Q6ZS27 426 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 C1orf186Q6ZWK4 172 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 PLEKHH3Q7Z736 793 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 SLC44A2Q8IWA5 706 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-203ENST00000372407 RSPH1Q8WYR4 309 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CELF6Q96J87 481 aaKnown RBP11.69□□□□□ -0.54
PTPRF-203ENST00000372407 BDH2Q9BUT1 245 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 F8VP50 259 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 EGFRP00533 1210 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 IFNA14P01570 189 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 RHOCP08134 193 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CYP3A4P08684 503 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 TPH1P17752 444 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 TNFRSF8P28908 595 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CTXN3Q4LDR2 81 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 SPANXN3Q5MJ09 141 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 LRRC74BQ6ZQY2 392 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 NT5DC4Q86YG4 428 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 OSCP1Q8WVF1 389 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 KAT5Q92993 513 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 VAT1Q99536 393 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 IDI2Q9BXS1 227 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 SYBUQ9NX95 663 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 DDX43Q9NXZ2 648 aaKnown RBP11.69□□□□□ -0.54
PTPRF-203ENST00000372407 ACTL7BQ9Y614 415 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 TMEM114B3SHH9 223 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 C2CD2LO14523 706 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 KLRC4O43908 158 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 VAPBO95292 243 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 ZNF682O95780 498 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 SCNN1BP51168 640 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 RHOAP61586 193 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 TRAF2Q12933 501 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 PACS2Q86VP3 889 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 GLMNQ92990 594 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CPNE1Q99829 537 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 HPS4Q9NQG7 708 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 KRT84Q9NSB2 600 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 CACNA2D2Q9NY47 1150 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 VPS28Q9UK41 221 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 STRCQ7RTU9 1775 aa11.69□□□□□ -0.54
PTPRF-203ENST00000372407 WDR27A2RRH5 827 aa11.68□□□□□ -0.54
PTPRF-203ENST00000372407 HACD1B0YJ81 288 aa11.68□□□□□ -0.54
PTPRF-203ENST00000372407 MRASO14807 208 aa11.68□□□□□ -0.54
PTPRF-203ENST00000372407 INPP4BO15327 924 aa11.68□□□□□ -0.54
PTPRF-203ENST00000372407 CLOCKO15516 846 aa11.68□□□□□ -0.54
PTPRF-203ENST00000372407 SERPINI2O75830 405 aa11.68□□□□□ -0.54
PTPRF-203ENST00000372407 HOXB8P17481 243 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms