RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 CADM4Q8NFZ8 388 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 SHC3Q92529 594 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 SIPA1Q96FS4 1042 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 ZNF419Q96HQ0 510 aaPredicted RBP19.63■□□□□ 0.73
TMEM53-201ENST00000372235 LHX5Q9H2C1 402 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 ITM2CQ9NQX7 267 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 SUN2Q9UH99 717 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 PCDHGC3Q9UN70 934 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 SLC6A14Q9UN76 642 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 CYP8B1Q9UNU6 501 aa19.63■□□□□ 0.73
TMEM53-201ENST00000372235 C4orf47A7E2U8 309 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 WASH3PC4AMC7 463 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 GABBR2O75899 941 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 SYPP08247 313 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 SERPINF2P08697 491 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 PABPC1P11940 636 aaKnown RBP19.62■□□□□ 0.73
TMEM53-201ENST00000372235 POLR2EP19388 210 aaKnown RBP19.62■□□□□ 0.73
TMEM53-201ENST00000372235 SLC9A1P19634 815 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 PON1P27169 355 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 HLA-FP30511 346 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 IRX4P78413 519 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 ZBTB16Q05516 673 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 GFPT1Q06210 699 aaPredicted RBP19.62■□□□□ 0.73
TMEM53-201ENST00000372235 SFSWAPQ12872 951 aaKnown RBP19.62■□□□□ 0.73
TMEM53-201ENST00000372235 ARHGAP44Q17R89 818 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 EFHC1Q5JVL4 640 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 CHST9Q7L1S5 443 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 ARMCX6Q7L4S7 300 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 KIAA0907Q7Z7F0 614 aaPredicted RBP19.62■□□□□ 0.73
TMEM53-201ENST00000372235 MFN1Q8IWA4 741 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 FRMD1Q8N878 549 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 DQX1Q8TE96 717 aaKnown RBP19.62■□□□□ 0.73
TMEM53-201ENST00000372235 CLEC4CQ8WTT0 213 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 NUP58Q9BVL2 599 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 PCED1AQ9H1Q7 454 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 ASNSD1Q9NWL6 643 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 USP36Q9P275 1121 aaKnown RBP19.62■□□□□ 0.73
TMEM53-201ENST00000372235 TJP2Q9UDY2 1190 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 NUP205Q92621 2012 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 DNAH14Q0VDD8 3507 aa19.62■□□□□ 0.73
TMEM53-201ENST00000372235 TBL1XO60907 577 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 MOCS3O95396 460 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 ASLP04424 464 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 DLDP09622 509 aaKnown RBP19.61■□□□□ 0.73
TMEM53-201ENST00000372235 ITPKAP23677 461 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 KRT9P35527 623 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 ST8SIA6P61647 398 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 PDCLQ13371 301 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 FNDC3BQ53EP0 1204 aaKnown RBP19.61■□□□□ 0.73
TMEM53-201ENST00000372235 DENND1BQ6P3S1 775 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 CLEC17AQ6ZS10 378 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 ZDHHC17Q8IUH5 632 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 ATP6V0D2Q8N8Y2 350 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 KDM1BQ8NB78 822 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 OR2T3Q8NH03 318 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 FIBINQ8TAL6 211 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 P2RY11Q96G91 374 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 SLC39A13Q96H72 371 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 BTN2A3PQ96KV6 586 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 FCRL2Q96LA5 508 aaPredicted RBP19.61■□□□□ 0.73
TMEM53-201ENST00000372235 PPP1R9BQ96SB3 815 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 TUBGCP2Q9BSJ2 902 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 NDST4Q9H3R1 872 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 ABCB8Q9NUT2 735 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.61■□□□□ 0.73
TMEM53-201ENST00000372235 CLEC4EQ9ULY5 219 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 NAALADL1Q9UQQ1 740 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 ABCA7Q8IZY2 2146 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 WDR87Q6ZQQ6 2873 aa19.61■□□□□ 0.73
TMEM53-201ENST00000372235 E5RJQ4 531 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 KCNK5O95279 499 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 IGLV3-19P01714 112 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 CFIP05156 583 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 FYNP06241 537 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 CEACAM1P13688 526 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 CSRP1P21291 193 aaKnown RBP19.6■□□□□ 0.73
TMEM53-201ENST00000372235 KCNA4P22459 653 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 OXCT1P55809 520 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 CDK17Q00537 523 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 CAMK2GQ13555 558 aaPredicted RBP19.6■□□□□ 0.73
TMEM53-201ENST00000372235 CDH18Q13634 790 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 VWA3BQ502W6 1294 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 FAM133BQ5BKY9 247 aaKnown RBP19.6■□□□□ 0.73
TMEM53-201ENST00000372235 IRF2BP1Q8IU81 584 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 RGL4Q8IZJ4 473 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 HDDC3Q8N4P3 179 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 PPP1R13BQ96KQ4 1090 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 HSPA12BQ96MM6 686 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 TMEM245Q9H330 911 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 SLC32A1Q9H598 525 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 TMEM74BQ9NUR3 256 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 WSB2Q9NYS7 404 aaPredicted RBP19.6■□□□□ 0.73
TMEM53-201ENST00000372235 SDK1Q7Z5N4 2213 aa19.6■□□□□ 0.73
TMEM53-201ENST00000372235 PATE3B3GLJ2 98 aa19.59■□□□□ 0.73
TMEM53-201ENST00000372235 PAPSS1O43252 624 aaPredicted RBP19.59■□□□□ 0.73
TMEM53-201ENST00000372235 HSF2BPO75031 334 aa19.59■□□□□ 0.73
TMEM53-201ENST00000372235 TPM2P07951 284 aa19.59■□□□□ 0.73
TMEM53-201ENST00000372235 C7P10643 843 aa19.59■□□□□ 0.73
TMEM53-201ENST00000372235 ENGP17813 658 aa19.59■□□□□ 0.73
TMEM53-201ENST00000372235 ABCB4P21439 1286 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms