RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 TRAPPC9Q96Q05 1148 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 SLC2A13Q96QE2 648 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 KCNK16Q96T55 309 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 NPY6RQ99463 290 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 VCXQ9H320 206 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 TMPRSS4Q9NRS4 437 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 ETNK2Q9NVF9 386 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 RABGEF1Q9UJ41 708 aa13.24□□□□□ -0.29
GPC3-201ENST00000370818 POC1B-GALNT4F8VUJ3 575 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 I3L4J1 428 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 ZBED1O96006 694 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 POMCP01189 267 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 FYNP06241 537 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 GOT1P17174 413 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 NOS2P35228 1153 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 PTDSS1P48651 473 aaKnown RBP13.23□□□□□ -0.29
GPC3-201ENST00000370818 TKTL1P51854 596 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 MGAT5Q09328 741 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 LRRC14Q15048 493 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 TMED2Q15363 201 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 TRIM71Q2Q1W2 868 aaKnown RBP13.23□□□□□ -0.29
GPC3-201ENST00000370818 C1QTNF12Q5T7M4 302 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 IGDCC3Q8IVU1 814 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 PDIK1LQ8N165 341 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 SIX6OS1Q8N1H7 587 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 ENDOVQ8N8Q3 282 aaKnown RBP13.23□□□□□ -0.29
GPC3-201ENST00000370818 RNF169Q8NCN4 708 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 RTP3Q9BQQ7 232 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 RAB6BQ9NRW1 208 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 PAK5Q9P286 719 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 MFHAS1Q9Y4C4 1052 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 ACTL7BQ9Y614 415 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 CFAP69A5D8W1 941 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 CHADO15335 359 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 NCBP2-AS2Q69YL0 99 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 CD300LGQ6UXG3 332 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 C3orf62Q6ZUJ4 267 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 CCDC33Q8N5R6 958 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 ATP11CQ8NB49 1132 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 PLEKHG4BQ96PX9 1271 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 NUDCD1Q96RS6 583 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 ADAM2Q99965 735 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 ULBP1Q9BZM6 244 aa13.23□□□□□ -0.29
GPC3-201ENST00000370818 RASA4BC9J798 803 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 RASA4O43374 803 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 AOC2O75106 756 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 AMPD1P23109 780 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 ITGA7Q13683 1181 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 EFTUD2Q15029 972 aaKnown RBP eCLIP13.22□□□□□ -0.295e-10■■■□□ 17.1
GPC3-201ENST00000370818 BBS9Q3SYG4 887 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 PABPC1LQ4VXU2 614 aaKnown RBP13.22□□□□□ -0.29
GPC3-201ENST00000370818 PAN2Q504Q3 1202 aaKnown RBP13.22□□□□□ -0.29
GPC3-201ENST00000370818 EFHC2Q5JST6 749 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 IRGCQ6NXR0 463 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 CTU1Q7Z7A3 348 aaKnown RBP13.22□□□□□ -0.29
GPC3-201ENST00000370818 TRABD2AQ86V40 505 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 AGGF1Q8N302 714 aaeCLIP13.22□□□□□ -0.294e-13■■□□□ 11.7
GPC3-201ENST00000370818 CCDC110Q8TBZ0 833 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 MGARPQ8TDB4 240 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 POPDC2Q9HBU9 364 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 MLXIPLQ9NP71 852 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 KCNK9Q9NPC2 374 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 DTLQ9NZJ0 730 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 CDH9Q9ULB4 789 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 YJEFN3A6XGL0 299 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 HHLA1C9JL84 531 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 HGSO14964 777 aaPredicted RBP13.22□□□□□ -0.29
GPC3-201ENST00000370818 AVILO75366 819 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 PIAS1O75925 651 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 B3GAT3O94766 335 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 ZFXP17010 805 aaPredicted RBP13.22□□□□□ -0.29
GPC3-201ENST00000370818 NR2C2P49116 596 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 DAOAP59103 153 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 SP3Q02447 781 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 PTK7Q13308 1070 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 TSNAXIP1Q2TAA8 658 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 SLC45A4Q5BKX6 768 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 RAB41Q5JT25 222 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 FAXCQ5TGI0 409 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 KCNT2Q6UVM3 1135 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 PCSK9Q8NBP7 692 aaKnown RBP13.22□□□□□ -0.29
GPC3-201ENST00000370818 FAM13CQ8NE31 585 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 PIGVQ9NUD9 493 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 PCDHGA4Q9Y5G9 962 aa13.22□□□□□ -0.29
GPC3-201ENST00000370818 SYNJ2BP-COX16A0A087WUM0 186 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 M0QYT0 321 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 CREB3O43889 395 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 BRCC3P46736 316 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 RASA2Q15283 850 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 PKN2Q16513 984 aaKnown RBP13.21□□□□□ -0.29
GPC3-201ENST00000370818 PSTKQ8IV42 348 aaKnown RBP13.21□□□□□ -0.29
GPC3-201ENST00000370818 ANKRD42Q8N9B4 389 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 DYDC1Q8WWB3 177 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 OLFM3Q96PB7 478 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 ARHGEF4Q9NR80 690 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 COX16Q9P0S2 106 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 SLC24A2Q9UI40 661 aa13.21□□□□□ -0.29
GPC3-201ENST00000370818 STAP1Q9ULZ2 295 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms