RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SCNN1AP37088 669 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 HNMTP50135 292 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GJA9P57773 515 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CWF19L1Q69YN2 538 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SLC35F3Q8IY50 421 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 C1orf52Q8N6N3 182 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ADAMTS10Q9H324 1103 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 KANSL2Q9H9L4 492 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CDHR2Q9BYE9 1310 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MST1RQ04912 1400 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PRPF4O43172 522 aaKnown RBP eCLIP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SOX15O60248 233 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PIK3R1P27986 724 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 NUP62P37198 522 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ERVK-21P61565 698 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GAS6Q14393 721 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SIX5Q8N196 739 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 C2orf40Q9H1Z8 148 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ZNHIT2Q9UHR6 403 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PRG4Q92954 1404 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CLDN25C9JDP6 229 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 HPRP00739 348 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 BROXQ5VW32 411 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 C11orf57Q6ZUT1 292 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 NDNFQ8TB73 568 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 EYA1Q99502 592 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 EXO5Q9H790 373 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 TM9SF3Q9HD45 589 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 NECTIN3Q9NQS3 549 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ASNSD1Q9NWL6 643 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 UBQLN1Q9UMX0 589 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RAD17O75943 681 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 KRT36O76013 467 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 SAGP10523 405 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MASP1P48740 699 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MACC1Q6ZN28 852 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 NECAB2Q7Z6G3 386 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 KIFC2Q96AC6 838 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CYP3A43Q9HB55 503 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 EIF2B3Q9NR50 452 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 HACD1B0YJ81 288 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CFAP99D6REC4 459 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ELP6Q0PNE2 266 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 COASYQ13057 564 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CIAPIN1Q6FI81 312 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 RPL22L1Q6P5R6 122 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 L3MBTL3Q96JM7 780 aaPredicted RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GDF3Q9NR23 364 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 R3HDM2Q9Y2K5 976 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PTPRJQ12913 1337 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PMPCBO75439 489 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 CYP7A1P22680 504 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MAGEA6P43360 314 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PTDSS1P48651 473 aaKnown RBP3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ZNF846Q147U1 533 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MTERF2Q49AM1 385 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PADI6Q6TGC4 694 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 GLYCTKQ8IVS8 523 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 MND1Q9BWT6 205 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 PCDHA7Q9UN72 937 aa3.85□□□□□ -1.79
SYNE1-207ENST00000367255 ABCA9Q8IUA7 1624 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PSIP1O75475 530 aaKnown RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CLUP10909 449 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 RRM1P23921 792 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SCN1BQ07699 218 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 GPALPP1Q8IXQ4 340 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MED15Q96RN5 788 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 GLOD4Q9HC38 313 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CAMSAP1Q5T5Y3 1602 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MLYCDO95822 493 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ARF4P18085 180 aaPredicted RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 IL32P24001 234 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 BTKQ06187 659 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 AKIRIN2Q53H80 203 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 KLHL26Q53HC5 615 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 USP30Q70CQ3 517 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 TMC2Q8TDI7 906 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 BTBD10Q9BSF8 475 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 AFF2P51816 1311 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CXorf51AA0A1B0GTR3 108 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MDM4O15151 490 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PRKAB2O43741 272 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PRKYO43930 277 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 GNG2P59768 71 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MRPS9P82933 396 aaKnown RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 UGT3A1Q6NUS8 523 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 CNDP1Q96KN2 507 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 SPAG4Q9NPE6 437 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 NUFIP1Q9UHK0 495 aaKnown RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 RGS5O15539 181 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ZBTB24O43167 697 aaPredicted RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ORC5O43913 435 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 PNPLA4P41247 253 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 NAPAP54920 295 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 USP38Q8NB14 1042 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 MAGOHBQ96A72 148 aaKnown RBP3.84□□□□□ -1.79
SYNE1-207ENST00000367255 LINGO1Q96FE5 620 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 ESYT3A0FGR9 886 aa3.84□□□□□ -1.79
SYNE1-207ENST00000367255 E7ENX8 843 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms