RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 WRAP73Q9P2S5 460 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 MORF4L1Q9UBU8 362 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 KBTBD13C9JR72 458 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 BIRC5O15392 142 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 MYL3P08590 195 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 CYP2F1P24903 491 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 ATP6V1E1P36543 226 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 COPAP53621 1224 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 SCUBE1Q8IWY4 988 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 GLMNQ92990 594 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 ITFG2Q969R8 447 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 ABHD8Q96I13 439 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 TOGARAM1Q9Y4F4 1720 aa5.51□□□□□ -1.53
CDC42BPA-204ENST00000366767 ERI2A8K979 691 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 MFN2O95140 757 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 UBA1P22314 1058 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 MGAT5Q09328 741 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 FOXD4Q12950 439 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 PDAP1Q13442 181 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ARMCX4Q5H9R4 360 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 DCAF12L1Q5VU92 463 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 SLC27A1Q6PCB7 646 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CLEC4FQ8N1N0 589 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 C2orf69Q8N8R5 385 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 GPR88Q9GZN0 384 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 RNPEPL1Q9HAU8 725 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CORO1CQ9ULV4 474 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 SH3GLB1Q9Y371 365 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 PCDHA11Q9Y5I1 949 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CROCCQ5TZA2 2017 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 A0A087WZ62 844 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TMEM150BA6NC51 233 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TRPC5OSA6NMA1 111 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 YDJCA8MPS7 323 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 LACTBL1A8MY62 500 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TRIM24O15164 1050 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 KPNA6O60684 536 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 GJB6O95452 261 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CXCL8P10145 99 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CAPRIN1Q14444 709 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 DMC1Q14565 340 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 B3GNT9Q6UX72 402 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 FRA10AC1Q70Z53 315 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 STRADAQ7RTN6 431 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 MTDHQ86UE4 582 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 SUN5Q8TC36 379 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 FDXACB1Q9BRP7 624 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 GLIS2Q9BZE0 524 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 FANCEQ9HB96 536 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ALG13Q9NP73 1137 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 VTI1BQ9UEU0 232 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 NENFQ9UMX5 172 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 KLHL20Q9Y2M5 609 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 AKAP11Q9UKA4 1901 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 EIF2S1P05198 315 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 PGAM1P18669 254 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 RPA3P35244 121 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 SOX6P35712 828 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CPT1AP50416 773 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 NOMO1Q15155 1222 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 DENND1BQ6P3S1 775 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 OR5B17Q8NGF7 314 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ACSF2Q96CM8 615 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 FIZ1Q96SL8 496 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 PPP1R16BQ96T49 567 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 MTFR1LQ9H019 292 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ILKAPQ9H0C8 392 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 DMAP1Q9NPF5 467 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 MBD2Q9UBB5 411 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ADAM28Q9UKQ2 775 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 POLIQ9UNA4 740 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 LRCH1Q9Y2L9 728 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 SRP72O76094 671 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 NPTXRO95502 500 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 SERPINE1P05121 402 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CDC25CP30307 473 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 GRM5P41594 1212 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CLCN3P51790 818 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CCDC142Q17RM4 750 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 HABP4Q5JVS0 413 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 BTBD8Q5XKL5 378 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 QKIQ96PU8 341 aaKnown RBP eCLIP5.5□□□□□ -1.531e-11■■■■■ 59.5
CDC42BPA-204ENST00000366767 MAGED2Q9UNF1 606 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 RREB1Q92766 1687 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ATP9BO43861 1147 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 SLURP2P0DP57 97 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ZC3H12AQ5D1E8 599 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 GPC2Q8N158 579 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 LZTR1Q8N653 840 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 COLGALT1Q8NBJ5 622 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 PPP2R3CQ969Q6 453 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 MTERF3Q96E29 417 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 TMA16Q96EY4 203 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 RCOR3Q9P2K3 495 aaPredicted RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CACNA1SQ13698 1873 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 STX7O15400 261 aaKnown RBP5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 ADSSP30520 456 aa5.5□□□□□ -1.53
CDC42BPA-204ENST00000366767 CYP2C18P33260 490 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms