RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 MORC3Q14149 939 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 RABEP1Q15276 862 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 TRIP6Q15654 476 aaKnown RBP3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 BTBD16Q32M84 506 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 ZACNQ401N2 412 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 EARS2Q5JPH6 523 aaKnown RBP3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 ANKRD40Q6AI12 368 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 ANO7Q6IWH7 933 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 LIN54Q6MZP7 749 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 DENND1AQ8TEH3 1009 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 WIPF2Q8TF74 440 aaPredicted RBP3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 COQ8BQ96D53 544 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 FAR2Q96K12 515 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 SENP7Q9BQF6 1050 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 KATNAL1Q9BW62 490 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 SCNM1Q9BWG6 230 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 VPS16Q9H269 839 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 CCDC134Q9H6E4 229 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 TRNAU1APQ9NX07 287 aaKnown RBP3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 TUBA8Q9NY65 449 aaPredicted RBP3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 MTMR4Q9NYA4 1195 aa3.66□□□□□ -1.82
RNU4-48P-201ENST00000365559 FAM90A18PA6NE21 464 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 FAM90A16PA6NEW6 464 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 FAM90A9PA6NNJ1 464 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 FAM90A5PA8MXJ8 464 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 SYT5O00445 386 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 ACKR2O00590 384 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 NKX2-8O15522 239 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 PPP6R2O75170 966 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 RFPL3SP0C7P2 107 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 FAM90A15PP0C7V4 464 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 FAM90A14PP0C7W9 464 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 CTSAP10619 480 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 RPS6KB1P23443 525 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 LMO1P25800 156 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 SERPINF1P36955 418 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 PNLIPRP1P54315 467 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 FOXL2P58012 376 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 TAS2R50P59544 299 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 RPL15P61313 204 aaKnown RBP3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 HSF1Q00613 529 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 ICA1Q05084 483 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 CHAF1AQ13111 956 aaPredicted RBP3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 SLC9C1Q4G0N8 1177 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 C10orf25Q5T742 122 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 WDR93Q6P2C0 686 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 DHRS13Q6UX07 377 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 RHPN2Q8IUC4 686 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 NANOGP1Q8N7R0 232 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 SMG7Q92540 1137 aaKnown RBP3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 PMM1Q92871 262 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 CUL5Q93034 780 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 EID2BQ96D98 161 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 REXO5Q96IC2 774 aaKnown RBP3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 LRFN1Q9P244 771 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 PI4KBQ9UBF8 816 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 RAB21Q9UL25 225 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 TRPC5Q9UL62 973 aaPredicted RBP3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 CNTN6Q9UQ52 1028 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 ZBTB1Q9Y2K1 713 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 SPATA31A5Q5VU36 1347 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 SPATA31A7Q8IWB4 1347 aa3.65□□□□□ -1.83
RNU4-48P-201ENST00000365559 SLC38A8A6NNN8 435 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 PPEF2O14830 753 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 TLR2O60603 784 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 MOSPD3O75425 235 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 ENO1P06733 434 aaKnown RBP3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 CPA2P48052 419 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 SLC37A1P57057 533 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 RPS13P62277 151 aaKnown RBP3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 ID2Q02363 134 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 SF3A3Q12874 501 aaKnown RBP eCLIP3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 TRIM14Q14142 442 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 TUBB8Q3ZCM7 444 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 TRIM60Q495X7 471 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 SHC4Q6S5L8 630 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 ZNF474Q6S9Z5 364 aaPredicted RBP3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 SLC39A5Q6ZMH5 540 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 DEF8Q6ZN54 512 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 UBE2Q1Q7Z7E8 422 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 MYLK4Q86YV6 388 aaPredicted RBP3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 UEVLDQ8IX04 471 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 C16orf52Q8NHV5 167 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 SCAMP5Q8TAC9 235 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 SCARB1Q8WTV0 552 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 RSC1A1Q92681 617 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 RMDN3Q96TC7 470 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 RTKNQ9BST9 563 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 TRIM2Q9C040 744 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 PRDM16Q9HAZ2 1276 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 MOV10Q9HCE1 1003 aaKnown RBP3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 DACT1Q9NYF0 836 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 ELOVL5Q9NYP7 299 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 DAPP1Q9UN19 280 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 SLC12A4Q9UP95 1085 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 LZTS1Q9Y250 596 aa3.64□□□□□ -1.83
RNU4-48P-201ENST00000365559 CNOT3O75175 753 aaKnown RBP3.63□□□□□ -1.83
RNU4-48P-201ENST00000365559 CNTN5O94779 1100 aa3.63□□□□□ -1.83
RNU4-48P-201ENST00000365559 ACTL6BO94805 426 aa3.63□□□□□ -1.83
RNU4-48P-201ENST00000365559 FGBP02675 491 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms