RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 KHSRPQ92945 711 aaKnown RBP eCLIP9.59□□□□□ -0.872e-7■□□□□ 8.8
GTF3C2-202ENST00000359541 STMN2Q93045 179 aa9.59□□□□□ -0.87
GTF3C2-202ENST00000359541 C7orf26Q96N11 449 aa9.59□□□□□ -0.87
GTF3C2-202ENST00000359541 RILPQ96NA2 401 aa9.59□□□□□ -0.87
GTF3C2-202ENST00000359541 ARHGEF4Q9NR80 690 aa9.59□□□□□ -0.87
GTF3C2-202ENST00000359541 NEBLO76041 1014 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 METTL18O95568 372 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 LRPAP1P30533 357 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 GLUD2P49448 558 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 STX3Q13277 289 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 BMPR2Q13873 1038 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 CHI3L2Q15782 390 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 DNAAF3Q8N9W5 541 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 SYT15Q9BQS2 421 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 DDX43Q9NXZ2 648 aaKnown RBP9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 DCDC2Q9UHG0 476 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 MID2Q9UJV3 735 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 AP1G2O75843 785 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 FAM155BO75949 473 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 RARBP10826 455 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 FGFR1P11362 822 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 CRHR1P34998 444 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 PRKD1Q15139 912 aaPredicted RBP9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 PRPF39Q86UA1 669 aaKnown RBP9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 RASSF3Q86WH2 238 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 PDCD7Q8N8D1 485 aaKnown RBP9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 AGAP11Q8TF27 550 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 SIGLEC10Q96LC7 697 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 CNGB3Q9NQW8 809 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 IRAK4Q9NWZ3 460 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 LNPEPQ9UIQ6 1025 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 ERI2A8K979 691 aaKnown RBP9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 TREHO43280 583 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 THP07101 528 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 SRGAP2BP0DMP2 458 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 MYL2P10916 166 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 CCNFP41002 786 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 MAP3K7CLP57077 242 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 TAF1CQ15572 869 aaPredicted RBP9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 XKR4Q5GH76 650 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 SPANXN3Q5MJ09 141 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 RFX8Q6ZV50 586 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 MARK2Q7KZI7 788 aaKnown RBP9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 C11orf84Q9BUA3 381 aaPredicted RBP9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 TSPYL2Q9H2G4 693 aaPredicted RBP9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 LRRC40Q9H9A6 602 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 CPA4Q9UI42 421 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 PTCH2Q9Y6C5 1203 aa9.58□□□□□ -0.88
GTF3C2-202ENST00000359541 WDR27A2RRH5 827 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 E7ENQ6 273 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 PSMD3O43242 534 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 MFSD11O43934 449 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 CIB2O75838 187 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 LUC7L3O95232 432 aaKnown RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 CELF2O95319 508 aaKnown RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 ETV4P43268 484 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 ATXN1P54253 815 aaKnown RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 MXRA7P84157 204 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 TSNAXIP1Q2TAA8 658 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 NBPF20Q3BBV1 942 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 PRAMEF19Q5SWL8 479 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 WSCD1Q658N2 575 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 STKLD1Q8NE28 680 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 SOCS4Q8WXH5 440 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 NTAN1Q96AB6 310 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 P2RY11Q96G91 374 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 SENP8Q96LD8 212 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 VAT1Q99536 393 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 GOLGA2P5Q9HBQ8 144 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 PPARGC1AQ9UBK2 798 aaKnown RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 TRIM33Q9UPN9 1127 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 GNEQ9Y223 722 aaKnown RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 PLXNB2O15031 1838 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 CARNS1A5YM72 827 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 DNAJC6O75061 913 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 DGKIO75912 1065 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 CBX6O95503 412 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 ANP32DO95626 131 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 ACAT1P24752 427 aaKnown RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 CDK18Q07002 472 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 FSCN1Q16658 493 aaKnown RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 TIFABQ6ZNK6 161 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 ARID3BQ8IVW6 561 aaPredicted RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 RNF169Q8NCN4 708 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 OXNAD1Q96HP4 312 aaPredicted RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 OLFM3Q96PB7 478 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 LGMNQ99538 433 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 TBC1D10AQ9BXI6 508 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 GTF2IRD1Q9UHL9 959 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 TRHDEQ9UKU6 1024 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 SUFUQ9UMX1 484 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 TRPV2Q9Y5S1 764 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 URB1O60287 2271 aaKnown RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 BPTFQ12830 3046 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 TRAFD1O14545 582 aaPredicted RBP9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 SPTLC1O15269 473 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 NCAM1P13591 858 aa9.57□□□□□ -0.88
GTF3C2-202ENST00000359541 YBX3P16989 372 aaKnown RBP eCLIP9.57□□□□□ -0.882e-7■■■■□ 25.2
GTF3C2-202ENST00000359541 TFE3P19532 575 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms