RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 PDP2Q9P2J9 529 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 AFDNP55196 1824 aaKnown RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 CHURC1-FNTBB4DL54 471 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 LSM8O95777 96 aaKnown RBP13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 MPOP05164 745 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 FGD3Q5JSP0 725 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 LRRC34Q8IZ02 419 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 DPY30Q9C005 99 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 KLHL3Q9UH77 587 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 DUSP12Q9UNI6 340 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 PXDNLA1KZ92 1463 aa13.03□□□□□ -0.32
LDLRAD4-201ENST00000359446 KPNA6O60684 536 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 MED24O75448 989 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 LTFP02788 710 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 CPA3P15088 417 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 SH3BP5LQ7L8J4 393 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 BDH2Q9BUT1 245 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZFYVE1Q9HBF4 777 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM20BO75063 409 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 MT-CO1P00395 513 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 VAV1P15498 845 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZNF24P17028 368 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 SLC1A6P48664 564 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 GPR15P49685 360 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 SLC25A24Q6NUK1 477 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZBTB49Q6ZSB9 765 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 CATSPER2Q96P56 530 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZMYM5Q9UJ78 669 aa13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 MYH9P35579 1960 aaKnown RBP13.02□□□□□ -0.32
LDLRAD4-201ENST00000359446 A0A0A6YYK5 440 aaPredicted RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 CCDC189A1A4V9 331 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 TRIM66O15016 1216 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 HLA-DQA2P01906 255 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 CXCL8P10145 99 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 MYL6P60660 151 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 MAD2L1Q13257 205 aaPredicted RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 DOK6Q6PKX4 331 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 EMC1Q8N766 993 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 DNAJC1Q96KC8 554 aaKnown RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 TMEM120AQ9BXJ8 343 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 IGFLR1Q9H665 355 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 CPA4Q9UI42 421 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 MAGEB16A2A368 324 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 SLC26A2P50443 739 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 RIPOR1Q6ZS17 1223 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 MTDHQ86UE4 582 aaKnown RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 CACTIN-AS1Q8N1I8 211 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 MFSD1Q9H3U5 465 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 IL6P05231 212 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 MAPKAPK2P49137 400 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 SMARCD1Q96GM5 515 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 CELF6Q96J87 481 aaKnown RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 MYH3P11055 1940 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 OASLQ15646 514 aaKnown RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 OTUD3Q5T2D3 398 aaPredicted RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 ZSWIM2Q8NEG5 633 aa13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 SNRNP27Q8WVK2 155 aaKnown RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 AKAP7Q9P0M2 348 aaPredicted RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 TIMM13Q9Y5L4 95 aaPredicted RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 TARBP1Q13395 1621 aaKnown RBP13.02□□□□□ -0.33
LDLRAD4-201ENST00000359446 MEI4A8MW99 385 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 H3BMM5 538 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 UBDO15205 165 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 INPP4BO15327 924 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 RRM1P23921 792 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 RALGDSQ12967 914 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 ARMC4Q5T2S8 1044 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 ATP8B4Q8TF62 1192 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 HIC2Q96JB3 615 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 FDXACB1Q9BRP7 624 aaPredicted RBP13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 CEP41Q9BYV8 373 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 C6orf62Q9GZU0 229 aaPredicted RBP13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 SMPD4Q9NXE4 827 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 OR56A5P0C7T3 313 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 AKAP5P24588 427 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 PSMB9P28065 219 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 GNA13Q14344 377 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 SNX30Q5VWJ9 437 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 PCNX4Q63HM2 1172 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 REPS1Q96D71 796 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 RMND5BQ96G75 393 aaPredicted RBP13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 ATXN3LQ9H3M9 355 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 H3BRB1 525 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 RBAK-RBAKDNI3L0D1 243 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 SKIV2L2P42285 1042 aaKnown RBP13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 PSMD7P51665 324 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 TBCELQ5QJ74 424 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 DENND6AQ8IWF6 608 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 TMEM132CQ8N3T6 1108 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 FBXO39Q8N4B4 442 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 TUT1Q9H6E5 874 aaKnown RBP13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 TMEM39AQ9NV64 488 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 SETD4Q9NVD3 440 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 IL1RAPL1Q9NZN1 696 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 PDE4DIPQ5VU43 2346 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 ARP10275 920 aa13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 NQO1P15559 274 aaKnown RBP13.01□□□□□ -0.33
LDLRAD4-201ENST00000359446 LBPP18428 481 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms