RNA–Protein interactions for RNA: ENST00000357365.7

SDCCAG3-202, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SDCCAG3, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-202ENST00000357365 SCN4BQ8IWT1 228 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 COLGALT1Q8NBJ5 622 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 SLAIN1Q8ND83 568 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 URGCPQ8TCY9 931 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 DEPDC1BQ8WUY9 529 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 TCP11X1B4DZS4 312 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 KCNK1O00180 336 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 TNFRSF10BO14763 440 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 GPR15P49685 360 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 WASHC5Q12768 1159 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 IFT88Q13099 833 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 MAPRE1Q15691 268 aaKnown RBP29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 TCTN1Q2MV58 587 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 KLHL38Q2WGJ6 581 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 OR12D3Q9UGF7 316 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 ZC3H7BQ9UGR2 993 aaKnown RBP29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 MRPL42Q9Y6G3 142 aaKnown RBP29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 MYO16Q9Y6X6 1858 aa29.44■■■□□ 2.3
SDCCAG3-202ENST00000357365 SELPP16109 830 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 MSH2P43246 934 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 NR1H3Q13133 447 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 SEMA5AQ13591 1074 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 BZW1Q7L1Q6 419 aaKnown RBP29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 MZB1Q8WU39 189 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 KLF6Q99612 283 aaPredicted RBP29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 PHF24Q9UPV7 400 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 TTLL3Q9Y4R7 772 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 FAM47DPA6NHR8 397 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 C1QAP02745 245 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 ATP2A2P16615 1042 aaKnown RBP29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 MAGEA3P43357 314 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 AIF1P55008 147 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 PDK1Q15118 436 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 MCUQ8NE86 351 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 CKAP2Q8WWK9 683 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 RNF34Q969K3 372 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 PGLYRP2Q96PD5 576 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 NKIRAS1Q9NYS0 192 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 SFMBT1Q9UHJ3 866 aa29.43■■■□□ 2.3
SDCCAG3-202ENST00000357365 LRIG2O94898 1065 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 RPA3P35244 121 aaPredicted RBP29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 RASA2Q15283 850 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 ARL13BQ3SXY8 428 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 ZNF567Q8N184 647 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 PDCD7Q8N8D1 485 aaKnown RBP29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 SIGLEC10Q96LC7 697 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 CYTH2Q99418 400 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 PAIP2Q9BPZ3 127 aaKnown RBP29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 RRN3Q9NYV6 651 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 FETUBQ9UGM5 382 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 GOLGA8RI6L899 631 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 MSI1O43347 362 aaKnown RBP29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 FAM155BO75949 473 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 F9P00740 461 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 KRT4P19013 534 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 TPSB2P20231 275 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 STX2P32856 288 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 GLUD2P49448 558 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 TPSAB1Q15661 275 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 GKAP1Q5VSY0 366 aaPredicted RBP29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 C6orf89Q6UWU4 347 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 SCD5Q86SK9 330 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 FAM193BQ96PV7 902 aaPredicted RBP29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 SMC6Q96SB8 1091 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 PNPLA8Q9NP80 782 aa29.42■■■□□ 2.3
SDCCAG3-202ENST00000357365 SCN5AQ14524 2016 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 SF3B1O75533 1304 aaKnown RBP eCLIP29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 CXorf49A8MYA2 514 aaPredicted RBP29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 MYO1CO00159 1063 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 ENPP3O14638 875 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 TRIM66O15016 1216 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 TSHRP16473 764 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 PSMB4P28070 264 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 APLP1P51693 650 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 C4orf22Q6V702 233 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 C4orf50Q6ZRC1 276 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 CEP57Q86XR8 500 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 PPCSQ9HAB8 311 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 NMUR1Q9HB89 426 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 FGFR1OP2Q9NVK5 253 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 MAD1L1Q9Y6D9 718 aa29.41■■■□□ 2.3
SDCCAG3-202ENST00000357365 FKTNO75072 461 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 GNRH1P01148 92 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 PAX3P23760 479 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 CDK7P50613 346 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 DDR2Q16832 855 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 FAM126BQ8IXS8 530 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 TTC9BQ8N6N2 239 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 ELAC2Q9BQ52 826 aaKnown RBP29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.4■■■□□ 2.38e-6■□□□□ 9
SDCCAG3-202ENST00000357365 ZCWPW1Q9H0M4 648 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 UNC93B1Q9H1C4 597 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 TMEM161AQ9NX61 479 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 GRID1Q9ULK0 1009 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 TADA2AO75478 443 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 OAZ2O95190 189 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 EPHB2P29323 1055 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 FOXN2P32314 431 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 CRADDP78560 199 aa29.4■■■□□ 2.3
SDCCAG3-202ENST00000357365 OLIG2Q13516 323 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms