RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 TMEM161BQ8NDZ6 487 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 OTULINQ96BN8 352 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 SPATA17Q96L03 361 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 NMRK1Q9NWW6 199 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 NDUFAF1Q9Y375 327 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 NCF1BA6NI72 391 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 NCF1CA8MVU1 366 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 ABLIM1O14639 778 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 RGS5O15539 181 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 VAPBO95292 243 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 NCF1P14598 390 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 RPL14P50914 215 aaKnown RBP15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 TAS2R40P59535 323 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 YWHAZP63104 245 aaKnown RBP15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 ATP1A4Q13733 1029 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 NEDD8Q15843 81 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 METTL7BQ6UX53 244 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 ZCCHC7Q8N3Z6 543 aaKnown RBP15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 TLCD1Q96CP7 247 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 ZNF512Q96ME7 567 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 ITGA11Q9UKX5 1188 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 hCG_1818297A0A087WSY0 165 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 E5RJQ4 531 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 ATXN8OSP0DMR3 200 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 ADGRF2Q8IZF7 708 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 SH3GL1Q99961 368 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 PHACTR1Q9C0D0 580 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 MUC3BQ9H195 1237 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 RAD54BQ9Y620 910 aa15.97■□□□□ 0.15
TRAPPC11-202ENST00000357207 C2orf81A6NN90 581 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 HACD1B0YJ81 288 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 ACKR2O00590 384 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 CYB561D2O14569 222 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 LIN7AO14910 233 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 PRPF4O43172 522 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 CRABP2P29373 138 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 NRF1Q16656 503 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 ZACNQ401N2 412 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 PRMT9Q6P2P2 845 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 BBS7Q8IWZ6 715 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 C2orf69Q8N8R5 385 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 CPB2Q96IY4 423 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 PPP1R10Q96QC0 940 aaKnown RBP15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 APBA2Q99767 749 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 KCTD14Q9BQ13 255 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 PIF1Q9H611 641 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 CYLDQ9NQC7 956 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 FARP1Q9Y4F1 1045 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 A8MUI8 341 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 TPP1O14773 563 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 USP12O75317 370 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 B3GAT3O94766 335 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 VTNP04004 478 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 RAP1GDS1P52306 607 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 SLC6A3Q01959 620 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 FBXO47Q5MNV8 452 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 ZFPM1Q8IX07 1006 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 ULK2Q8IYT8 1036 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 CENPLQ8N0S6 344 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 PCDH20Q8N6Y1 951 aaKnown RBP15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 WDR18Q9BV38 432 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 DMAP1Q9NPF5 467 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 XPNPEP3Q9NQH7 507 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 RABGEF1Q9UJ41 708 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 MOSPD1Q9UJG1 213 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 GAKO14976 1311 aa15.96■□□□□ 0.15
TRAPPC11-202ENST00000357207 ERI2A8K979 691 aaKnown RBP15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 GSC2O15499 205 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 TKTL1P51854 596 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 C21orf59P57076 290 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 TRAF2Q12933 501 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 KRR1Q13601 381 aaKnown RBP15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 KCTD21Q4G0X4 260 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 PTAR1Q7Z6K3 402 aaPredicted RBP15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 ATP6V0D2Q8N8Y2 350 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 BHLHE22Q8NFJ8 381 aaPredicted RBP15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 SEMA4DQ92854 862 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 PCDHB18PQ96TA0 734 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 C9orf16Q9BUW7 83 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 KATNAL1Q9BW62 490 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 LRRC4CQ9HCJ2 640 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 TRHDEQ9UKU6 1024 aa15.96■□□□□ 0.14
TRAPPC11-202ENST00000357207 MGRN1O60291 552 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 ZBTB7AO95365 584 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 C6orf222P0C671 652 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 ERVK-10P10266 1014 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 GMPSP49915 693 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 C10orf120Q5SQS8 335 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 VPS33AQ96AX1 596 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 PAWRQ96IZ0 340 aaKnown RBP15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 MAGED4Q96JG8 741 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 SEMA6AQ9H2E6 1030 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 ARL8BQ9NVJ2 186 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 PACSIN3Q9UKS6 424 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 ASTN2O75129 1339 aaPredicted RBP15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 SPDYE5A6NIY4 337 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 PHGDHO43175 533 aaKnown RBP15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 PEX1O43933 1283 aa15.95■□□□□ 0.14
TRAPPC11-202ENST00000357207 SERPINA6P08185 405 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms