RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 CNR2P34972 360 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 CYP2J2P51589 502 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 HK2P52789 917 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 MCL1Q07820 350 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 CYP24A1Q07973 514 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 DSC1Q08554 894 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 SRSF5Q13243 272 aaKnown RBP7.39□□□□□ -1.23
VPS13A-201ENST00000355766 TUBB2AQ13885 445 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 PSMD6Q15008 389 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 SF3A2Q15428 464 aaKnown RBP7.39□□□□□ -1.23
VPS13A-201ENST00000355766 KLHDC7AQ5VTJ3 777 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 KRT39Q6A163 491 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 FUT10Q6P4F1 479 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 PDXDC1Q6P996 788 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 SRGAP1Q7Z6B7 1085 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 MRPL10Q7Z7H8 261 aaKnown RBP7.39□□□□□ -1.23
VPS13A-201ENST00000355766 VPS36Q86VN1 386 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 CREG2Q8IUH2 290 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 CREBRFQ8IUR6 639 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 FBXO15Q8NCQ5 510 aaPredicted RBP7.39□□□□□ -1.23
VPS13A-201ENST00000355766 PARD3BQ8TEW8 1205 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 PRPF31Q8WWY3 499 aaKnown RBP7.39□□□□□ -1.23
VPS13A-201ENST00000355766 POMGNT1Q8WZA1 660 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 TMEM143Q96AN5 459 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 BICD1Q96G01 975 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 B3GALT6Q96L58 329 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 TSPAN18Q96SJ8 248 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 CBWD1Q9BRT8 395 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 TUBB2BQ9BVA1 445 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 KRTAP4-9Q9BYQ8 210 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 FZD8Q9H461 694 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 HAUS4Q9H6D7 363 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 MMRN2Q9H8L6 949 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 TMEM8AQ9HCN3 771 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 FAM207AQ9NSI2 230 aaPredicted RBP7.39□□□□□ -1.23
VPS13A-201ENST00000355766 SUCLA2Q9P2R7 463 aaPredicted RBP7.39□□□□□ -1.23
VPS13A-201ENST00000355766 APEX2Q9UBZ4 518 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 TMEM59LQ9UK28 342 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 ADAM30Q9UKF2 790 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 NDRG2Q9UN36 371 aaKnown RBP7.39□□□□□ -1.23
VPS13A-201ENST00000355766 TNFSF13BQ9Y275 285 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 CORINQ9Y5Q5 1042 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 SETXQ7Z333 2677 aaKnown RBP7.39□□□□□ -1.23
VPS13A-201ENST00000355766 IGF2RP11717 2491 aa7.39□□□□□ -1.23
VPS13A-201ENST00000355766 COL4A2P08572 1712 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 LRRC53A6NM62 1247 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 SRRM3A6NNA2 597 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-201ENST00000355766 UPK3BL1B0FP48 263 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 CHURC1-FNTBB4DL54 471 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 UPK3BL2E5RIL1 263 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 MAN2B1O00754 1011 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 CLIC2O15247 247 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 CCL16O15467 120 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 NOL4O94818 638 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 PAPSS2O95340 614 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-201ENST00000355766 MCF2P10911 925 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 RAC2P15153 192 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 FERP16591 822 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 TPP2P29144 1249 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-201ENST00000355766 MLH1P40692 756 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 FNTBP49356 437 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 CASP4P49662 377 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 JAM2P57087 298 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 SATB1Q01826 763 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 GCNT1Q02742 428 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 SPA17Q15506 151 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 GAB4Q2WGN9 574 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 USP41Q3LFD5 358 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 PPM1LQ5SGD2 360 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 UBXN11Q5T124 520 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 SFMBT2Q5VUG0 894 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 TCERG1LQ5VWI1 586 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 DPY19L2P1Q6NXN4 242 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 SLC39A4Q6P5W5 647 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 WDR59Q6PJI9 974 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 MAEAQ7L5Y9 396 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 LONP2Q86WA8 852 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 NT5DC4Q86YG4 428 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 BRSK2Q8IWQ3 736 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 LRRC56Q8IYG6 542 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-201ENST00000355766 KIF18AQ8NI77 898 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 EEF2KMTQ96G04 330 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 CCDC42Q96M95 316 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 NLRP4Q96MN2 994 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 SPAG5Q96R06 1193 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 LSM14BQ9BX40 385 aaKnown RBP7.38□□□□□ -1.23
VPS13A-201ENST00000355766 STK33Q9BYT3 514 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 GPR62Q9BZJ7 368 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 UBN1Q9NPG3 1134 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 RXFP3Q9NSD7 469 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 PARP2Q9UGN5 583 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 AGO2Q9UKV8 859 aaKnown RBP7.38□□□□□ -1.23
VPS13A-201ENST00000355766 WASF3Q9UPY6 502 aa7.38□□□□□ -1.23
VPS13A-201ENST00000355766 EPN1Q9Y6I3 576 aaPredicted RBP7.38□□□□□ -1.23
VPS13A-201ENST00000355766 WDFY3Q8IZQ1 3526 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 ARL5CA6NH57 179 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 BTNL10A8MVZ5 291 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 F8VZ95 297 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 K7ESF4 209 aa7.37□□□□□ -1.23
VPS13A-201ENST00000355766 OGTO15294 1046 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms