RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 TYRP14679 529 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 TGM1P22735 817 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 YWHAGP61981 247 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDRT1-202ENST00000354433 GCNT1Q02742 428 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 ARID5AQ03989 594 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 PDE4CQ08493 712 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 ADIGQ0VDE8 80 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 CSRP2Q16527 193 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 HSF5Q4G112 596 aaPredicted RBP12.04□□□□□ -0.48
CDRT1-202ENST00000354433 USP39Q53GS9 565 aaKnown RBP12.04□□□□□ -0.48
CDRT1-202ENST00000354433 TRMT11Q7Z4G4 463 aaKnown RBP12.04□□□□□ -0.48
CDRT1-202ENST00000354433 SCD5Q86SK9 330 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 ETFBKMTQ8IXQ9 262 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 IL17RCQ8NAC3 791 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 TRIM58Q8NG06 486 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 UBA3Q8TBC4 463 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 SYT11Q9BT88 431 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDRT1-202ENST00000354433 ULBP1Q9BZM6 244 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 DLL3Q9NYJ7 618 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 EBF1Q9UH73 591 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 ADAMTS1Q9UHI8 967 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 INVSQ9Y283 1065 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 MRFAP1Q9Y605 127 aa12.04□□□□□ -0.48
CDRT1-202ENST00000354433 ATG2BQ96BY7 2078 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 TCRBV21S2A2A0A5A6 115 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 TULP2O00295 520 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 TRIM24O15164 1050 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 STC2O76061 302 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 EPN2O95208 641 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 ZBED1O96006 694 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 VDRP11473 427 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 KCNA4P22459 653 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 COG7P83436 770 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 CREB5Q02930 508 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 PLK5Q496M5 336 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 EMC10Q5UCC4 262 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 ARHGEF19Q8IW93 802 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 FAM71AQ8IYT1 594 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 SLC30A5Q8TAD4 765 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 NETO1Q8TDF5 533 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 HMGB4Q8WW32 186 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 SHC3Q92529 594 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 LOXL4Q96JB6 756 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 SPACA7Q96KW9 195 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 PLK2Q9NYY3 685 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 MARCH2Q9P0N8 246 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 WDR35Q9P2L0 1181 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 TRIM10Q9UDY6 481 aa12.03□□□□□ -0.48
CDRT1-202ENST00000354433 CEP250Q9BV73 2442 aa12.02□□□□□ -0.48
CDRT1-202ENST00000354433 SLC12A8A0AV02 714 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 M0QYV0 167 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 O00370 1275 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 FOXN3O00409 490 aaPredicted RBP12.02□□□□□ -0.49
CDRT1-202ENST00000354433 FOXD2O60548 495 aaPredicted RBP12.02□□□□□ -0.49
CDRT1-202ENST00000354433 GREM1O60565 184 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 RHOBTB1O94844 696 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 SETSIPP0DME0 302 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 LCP1P13796 627 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 CORO1AP31146 461 aaKnown RBP12.02□□□□□ -0.49
CDRT1-202ENST00000354433 MPLP40238 635 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 WASP42768 502 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 TNFRSF4P43489 277 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 KIR2DL1P43626 348 aaPredicted RBP12.02□□□□□ -0.49
CDRT1-202ENST00000354433 DGKGP49619 791 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 ARHGAP44Q17R89 818 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 RAB41Q5JT25 222 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 ALKBH5Q6P6C2 394 aaKnown RBP12.02□□□□□ -0.49
CDRT1-202ENST00000354433 TMEM92Q6UXU6 159 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 C11orf74Q86VG3 221 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 CHPFQ8IZ52 775 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 RNF139Q8WU17 664 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 KAT5Q92993 513 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 ALS2CR12Q96Q35 445 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 UBXN6Q9BZV1 441 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 CDC23Q9UJX2 597 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 ZNF510Q9Y2H8 683 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 WDR87Q6ZQQ6 2873 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 DMXL1Q9Y485 3027 aa12.02□□□□□ -0.49
CDRT1-202ENST00000354433 A0A0A6YYK5 440 aaPredicted RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 DCDC2BA2VCK2 349 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 PIK3R2O00459 728 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 ZBTB24O43167 697 aaPredicted RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 CACNG3O60359 315 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 CYBBP04839 570 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 PAEPP09466 180 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 HOXB2P14652 356 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 BRD2P25440 801 aaKnown RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 CHKAP35790 457 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 RGS7P49802 495 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 ATXN1P54253 815 aaKnown RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 TUBB4BP68371 445 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 SF3A2Q15428 464 aaKnown RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 IFI16Q16666 785 aaKnown RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 PAPD7Q5XG87 772 aaKnown RBP12.01□□□□□ -0.49
CDRT1-202ENST00000354433 SDE2Q6IQ49 451 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 RASSF3Q86WH2 238 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 DENND1CQ8IV53 801 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 PHTF2Q8N3S3 785 aa12.01□□□□□ -0.49
CDRT1-202ENST00000354433 RBBP8NLQ8NC74 664 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms