RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ANKRD12Q6UB98 2062 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 IGKV6D-21A0A0A0MT36 114 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 NDC80O14777 642 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 ITGB1P05556 798 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 SLC25A11Q02978 314 aaKnown RBP13.71□□□□□ -0.22
CASC4-202ENST00000345795 PTP4A2Q12974 167 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 TIGD5Q53EQ6 642 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 ANKRD20A2Q5SQ80 823 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 MARCH8Q5T0T0 291 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 ANKRD20A1Q5TYW2 823 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 GPRIN1Q7Z2K8 1008 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 PTAR1Q7Z6K3 402 aaPredicted RBP13.71□□□□□ -0.22
CASC4-202ENST00000345795 CRLF3Q8IUI8 442 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 MFSD3Q96ES6 412 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 SP110Q9HB58 689 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 STYXL1Q9Y6J8 313 aa13.71□□□□□ -0.22
CASC4-202ENST00000345795 ARL5CA6NH57 179 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 SNX3O60493 162 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 VAPBO95292 243 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 SNRPAP09012 282 aaKnown RBP13.7□□□□□ -0.22
CASC4-202ENST00000345795 AQP5P55064 265 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 CTBP1Q13363 440 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 COL9A2Q14055 689 aaPredicted RBP13.7□□□□□ -0.22
CASC4-202ENST00000345795 LAYNQ6UX15 382 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 STRA8Q7Z7C7 330 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 TTC7BQ86TV6 843 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 LONP2Q86WA8 852 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 ZNF75CPQ92670 426 aaPredicted RBP13.7□□□□□ -0.22
CASC4-202ENST00000345795 SCLYQ96I15 445 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 SNX27Q96L92 541 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 MYLK2Q9H1R3 596 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 STARD7Q9NQZ5 370 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 PIGVQ9NUD9 493 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 PPP1R12AO14974 1030 aaPredicted RBP13.7□□□□□ -0.22
CASC4-202ENST00000345795 LGR5O75473 907 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 LTFP02788 710 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 FCGRTP55899 365 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 ITGA9Q13797 1035 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 HIC1Q14526 733 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 ZNF460Q14592 562 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 CDCA2Q69YH5 1023 aaPredicted RBP13.7□□□□□ -0.22
CASC4-202ENST00000345795 ZNF410Q86VK4 478 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 CHSY1Q86X52 802 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 CD302Q8IX05 232 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 FUKQ8N0W3 1084 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 SH3TC2Q8TF17 1288 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 ALKBH8Q96BT7 664 aaKnown RBP13.7□□□□□ -0.22
CASC4-202ENST00000345795 MS4A4AQ96JQ5 239 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 SHOC2Q9UQ13 582 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 NCF1BA6NI72 391 aaPredicted RBP13.7□□□□□ -0.22
CASC4-202ENST00000345795 NCF1CA8MVU1 366 aaPredicted RBP13.7□□□□□ -0.22
CASC4-202ENST00000345795 E9PBE3 544 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 KLHL41O60662 606 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 CRCPO75575 148 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 NCF1P14598 390 aaPredicted RBP13.7□□□□□ -0.22
CASC4-202ENST00000345795 PCSK1P29120 753 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 WEE1P30291 646 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 SEMG2Q02383 582 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 PRPSAP1Q14558 356 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 CTXN3Q4LDR2 81 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 RFWD2Q8NHY2 731 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 THTPAQ9BU02 230 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 PLK2Q9NYY3 685 aa13.7□□□□□ -0.22
CASC4-202ENST00000345795 LTBP3Q9NS15 1303 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 DRG2P55039 364 aaKnown RBP13.69□□□□□ -0.22
CASC4-202ENST00000345795 PDCD2Q16342 344 aaPredicted RBP13.69□□□□□ -0.22
CASC4-202ENST00000345795 FAM35AQ86V20 835 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 FITM2Q8N6M3 262 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 SERAC1Q96JX3 654 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 NDNQ99608 321 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 BEGAINQ9BUH8 593 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 ADAM7Q9H2U9 754 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 PIGRP01833 764 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 NFKB1P19838 968 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 PMLP29590 882 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 CHRNA4P43681 627 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 GPX6P59796 221 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 MRPS6P82932 125 aaKnown RBP13.69□□□□□ -0.22
CASC4-202ENST00000345795 MUM1Q2TAK8 710 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 TRABD2AQ86V40 505 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 FICDQ9BVA6 458 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 RBM22Q9NW64 420 aaKnown RBP eCLIP13.69□□□□□ -0.22
CASC4-202ENST00000345795 UTP6Q9NYH9 597 aaKnown RBP13.69□□□□□ -0.22
CASC4-202ENST00000345795 DNAJC25-GNG10A0A024R161 153 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 SLC12A8A0AV02 714 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 TUBP50607 506 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 RASSF2P50749 326 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 KLF1Q13351 362 aaPredicted RBP13.69□□□□□ -0.22
CASC4-202ENST00000345795 C6orf163Q5TEZ5 329 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 VWA5B1Q5TIE3 1220 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 ALYREFQ86V81 257 aaKnown RBP13.69□□□□□ -0.22
CASC4-202ENST00000345795 CD99L2Q8TCZ2 262 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 MTG1Q9BT17 334 aaPredicted RBP13.69□□□□□ -0.22
CASC4-202ENST00000345795 CHRAC1Q9NRG0 131 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 SYBUQ9NX95 663 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 DTLQ9NZJ0 730 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 NENFQ9UMX5 172 aa13.69□□□□□ -0.22
CASC4-202ENST00000345795 LY75O60449 1722 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 IVDP26440 423 aa13.68□□□□□ -0.22
CASC4-202ENST00000345795 CACNA2D1P54289 1103 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms