RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 C9orf16Q9BUW7 83 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PPA2Q9H2U2 334 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PNPLA8Q9NP80 782 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TSPYL4Q9UJ04 414 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CBY3A6NI87 242 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TSPAN4O14817 238 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TSPAN3O60637 253 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 GTF2IP78347 998 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SPOCK1Q08629 439 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TSNQ15631 228 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ANO7Q6IWH7 933 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 OR6Q1Q8NGQ2 317 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 UROC1Q96N76 676 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 NXF1Q9UBU9 619 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 FBXO40Q9UH90 709 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 NOVA2Q9UNW9 492 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TBC1D30Q9Y2I9 924 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 IRAK3Q9Y616 596 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MAST3O60307 1309 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 RTEL1-TNFRSF6BF6WH68 1400 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TNPO2O14787 897 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PJA2O43164 708 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ANXA6P08133 673 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DPEP1P16444 411 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TFAMQ00059 246 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TROQ12816 1431 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ME3Q16798 604 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 RIPPLY2Q5TAB7 128 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PGM2L1Q6PCE3 622 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CCBE1Q6UXH8 406 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CFAP206Q8IYR0 622 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 LRRC1Q9BTT6 524 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 FRMD8P1Q9BZ68 369 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MKRN2Q9H000 416 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CCDC177Q9NQR7 707 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 FAM105AQ9NUU6 356 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 COMMD9Q9P000 198 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ADAM22Q9P0K1 906 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 STUB1Q9UNE7 303 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 KCNIP3Q9Y2W7 256 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DGKBQ9Y6T7 804 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ABCC4O15439 1325 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 KRBOX1C9JBD0 128 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 GSTM2P28161 218 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MAGEA11P43364 429 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 HLCSP50747 726 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CDH4P55283 916 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PPP2R2DQ66LE6 453 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 LRRC66Q68CR7 880 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PCYT1BQ9Y5K3 369 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 H7C1Q1 480 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PHGDHO43175 533 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 OGNP20774 298 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CHKAP35790 457 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 FBXO48Q5FWF7 155 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SPATC1Q76KD6 591 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PPP4R1LQ9P1A2 415 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ANKARQ7Z5J8 1434 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SPDYE2BA6NHP3 402 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 IFRD1O00458 451 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 LINGO3P0C6S8 592 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SPDYE6P0CI01 402 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SPDYE2Q495Y8 402 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 TPTE2Q6XPS3 522 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PLD5Q8N7P1 536 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 RDH12Q96NR8 316 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 POLR3BQ9NW08 1133 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PPARGC1AQ9UBK2 798 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 NFU1Q9UMS0 254 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SPDYE16A6NNV3 312 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 IDH1O75874 414 aaKnown RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CSF1RP07333 972 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CAPGP40121 348 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 GALK2Q01415 458 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 KYQ8NBH2 561 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 LINS1Q8NG48 757 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PAQR8Q8TEZ7 354 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CTPS2Q9NRF8 586 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 ABCC8Q09428 1581 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CCNDBP1O95273 360 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 AXLP30530 894 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SKP1P63208 163 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 OPALINQ96PE5 141 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MGAT4AQ9UM21 535 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PCK2Q16822 640 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 KCTD19Q17RG1 926 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 Q3ZCU0 254 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 RELL1Q8IUW5 271 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 RERGLQ9H628 205 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 PLOD2O00469 737 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 OPN1LWP04000 364 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 LDHCP07864 332 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 SLC2A5P22732 501 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 USP46P62068 366 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 IFRD2Q12894 506 aaPredicted RBP3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MTMR2Q13614 643 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MPP5Q8N3R9 675 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 CCDC126Q96EE4 140 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 DNAJC7Q99615 494 aa3.85□□□□□ -1.79
SYNE2-202ENST00000344113 MLXIPQ9HAP2 919 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms