RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TGDSO95455 350 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 KRT75O95678 551 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 ESRRBO95718 433 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 PGK2P07205 417 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 CCDC130P13994 396 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 CD247P20963 164 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 NR4A1P22736 598 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 GABRB3P28472 473 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 BMXP51813 675 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 NDST2P52849 883 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 GTF2BQ00403 316 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 BFSP1Q12934 665 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 SPCS2Q15005 226 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 STXBP2Q15833 593 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 TRIM71Q2Q1W2 868 aaKnown RBP12.2□□□□□ -0.46
RTN3-203ENST00000341307 Q3C1V9 767 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 KAZNQ674X7 775 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 CYP2U1Q7Z449 544 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 HIPK4Q8NE63 616 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 GSDMBQ8TAX9 411 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 CCDC138Q96M89 665 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 ACCSQ96QU6 501 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 OLFM1Q99784 485 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 SMYD3Q9H7B4 428 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 TXNRD2Q9NNW7 524 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 ALG13Q9NP73 1137 aaKnown RBP12.2□□□□□ -0.46
RTN3-203ENST00000341307 PALMDQ9NP74 551 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 CNGB3Q9NQW8 809 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 ANKEF1Q9NU02 776 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 HSPBP1Q9NZL4 362 aa12.2□□□□□ -0.46
RTN3-203ENST00000341307 ARHGAP42A6NI28 874 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 POC1B-GALNT4F8VUJ3 575 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 XPO1O14980 1071 aaKnown RBP12.19□□□□□ -0.46
RTN3-203ENST00000341307 CLOCKO15516 846 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 STAM2O75886 525 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 ATE1O95260 518 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 PSAPP07602 524 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 P4HA1P13674 534 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 ADSSP30520 456 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 FKBP1BP68106 108 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 IRX4P78413 519 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 TSPY1Q01534 308 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 PPP3CAQ08209 521 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 SELENBP1Q13228 472 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 PCSK7Q16549 785 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 MTERF2Q49AM1 385 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 CCDC58Q4VC31 144 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 SPRYD7Q5W111 196 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 ABHD15Q6UXT9 468 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 TDRPQ86YL5 185 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 TTC13Q8NBP0 860 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 TMEM161BQ8NDZ6 487 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 TANKQ92844 425 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 ELMO3Q96BJ8 720 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 PTPN18Q99952 460 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 SENP7Q9BQF6 1050 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 ZSWIM1Q9BR11 485 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 HAUS8Q9BT25 410 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 C2orf49Q9BVC5 232 aaPredicted RBP12.19□□□□□ -0.46
RTN3-203ENST00000341307 SPATC1LQ9H0A9 340 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 KLHL25Q9H0H3 589 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 TMEM206Q9H813 350 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 SENP1Q9P0U3 644 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 GNEQ9Y223 722 aaKnown RBP12.19□□□□□ -0.46
RTN3-203ENST00000341307 MKI67P46013 3256 aaKnown RBP12.19□□□□□ -0.46
RTN3-203ENST00000341307 SF3B1O75533 1304 aaKnown RBP eCLIP12.19□□□□□ -0.466e-9■■■■■ 64.2
RTN3-203ENST00000341307 PAPPA2Q9BXP8 1791 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 WDR81Q562E7 1941 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 DENND3A2RUS2 1198 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 GOLGA8CPA6NN73 597 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 E5RJQ4 531 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 CSDE1O75534 798 aaKnown RBP12.19□□□□□ -0.46
RTN3-203ENST00000341307 GCLMP48507 274 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 SLC25A3Q00325 362 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 TRIP13Q15645 432 aaPredicted RBP12.19□□□□□ -0.46
RTN3-203ENST00000341307 C4orf22Q6V702 233 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 SLC13A5Q86YT5 568 aaPredicted RBP12.19□□□□□ -0.46
RTN3-203ENST00000341307 CLVS1Q8IUQ0 354 aaPredicted RBP12.19□□□□□ -0.46
RTN3-203ENST00000341307 CHST13Q8NET6 341 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 JADE3Q92613 823 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 SLCO2A1Q92959 643 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 THAP11Q96EK4 314 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 FAM84AQ96KN4 292 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 CCDC106Q9BWC9 280 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 RNF38Q9H0F5 515 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 LRRC19Q9H756 370 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 XPNPEP1Q9NQW7 623 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 SCINQ9Y6U3 715 aa12.19□□□□□ -0.46
RTN3-203ENST00000341307 A0A0G2JLL6 359 aaPredicted RBP12.18□□□□□ -0.46
RTN3-203ENST00000341307 RGS13O14921 159 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 ICMTO60725 284 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 CRYZL1O95825 349 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 ABHD2P08910 425 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 SLC10A3P09131 477 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 JAK1P23458 1154 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 CLK3P49761 638 aaKnown RBP12.18□□□□□ -0.46
RTN3-203ENST00000341307 JAM2P57087 298 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 MYL7Q01449 175 aa12.18□□□□□ -0.46
RTN3-203ENST00000341307 DMP1Q13316 513 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms