RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 SLC22A9Q8IVM8 553 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 MYLPFQ96A32 169 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 TRPM5Q9NZQ8 1165 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 LEMD2Q8NC56 503 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 URGCPQ8TCY9 931 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 PTCD3Q96EY7 689 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 TPD52L3Q96J77 140 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 FAM111AQ96PZ2 611 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 PUS7LQ9H0K6 701 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 NCKIPSDQ9NZQ3 722 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 C3orf18Q9UK00 162 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 SHOC2Q9UQ13 582 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 GIT1Q9Y2X7 761 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 ASLP04424 464 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 SERPINA6P08185 405 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 CYP2D6P10635 497 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 TGM2P21980 687 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 ACADLP28330 430 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 AVPR1AP37288 418 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 RGS4P49798 205 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 PSMC5P62195 406 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 C11orf63Q6NUN7 778 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 SAPCD2Q86UD0 394 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 ADCY4Q8NFM4 1077 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 APOPT1Q96IL0 206 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 PTGES3LE9PB15 166 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 GTF2E2P29084 291 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 MKRN4PQ13434 485 aaPredicted RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 OR8H3Q8N146 312 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 COPRSQ9NQ92 184 aa10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 SRP68Q9UHB9 627 aaKnown RBP10.57□□□□□ -0.72
SPTBN1-201ENST00000333896 C3orf70A6NLC5 250 aaPredicted RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 KCNK1O00180 336 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 FCHO1O14526 889 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 RIPK2O43353 540 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 TMEM253P0C7T8 217 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ADORA2BP29275 332 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 GCLMP48507 274 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 KPNA1P52294 538 aaPredicted RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 IL31Q6EBC2 164 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 PPP1R18Q6NYC8 613 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 CCDC24Q8N4L8 307 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 BHLHE41Q9C0J9 482 aaPredicted RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 DUSP12Q9UNI6 340 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ADGRF5Q8IZF2 1346 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 C2CD2LO14523 706 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 SULT1B1O43704 296 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 TSPAN19P0C672 248 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 DRD4P21917 467 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 DSG3P32926 999 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 TWF1Q12792 350 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 SMCO1Q147U7 214 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 PYDC1Q8WXC3 89 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 EDC3Q96F86 508 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 AGPAT1Q99943 283 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 FUCA2Q9BTY2 467 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 RAB6BQ9NRW1 208 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 FAM196BA6NMK8 535 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 CENPBD1B2RD01 187 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 MYL12BO14950 172 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 LYNP07948 512 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 WEE2P0C1S8 567 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 CASP12Q6UXS9 341 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 CDC42EP4Q9H3Q1 356 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 APEX2Q9UBZ4 518 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 EIF3LQ9Y262 564 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 AATKQ6ZMQ8 1374 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 TMEM114B3SHH9 223 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 MYCP01106 439 aaPredicted RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ETS2P15036 469 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 CCNA1P78396 465 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF268Q14587 947 aaPredicted RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 DGKDQ16760 1214 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ANKRD26P1Q6NSI1 321 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 LINC00523Q86TU6 105 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ALLCQ8N6M5 410 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 XXYLT1Q8NBI6 393 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 GOLPH3Q9H4A6 298 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ANKRD26Q9UPS8 1709 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 DENND3A2RUS2 1198 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ZBTB11O95625 1053 aaPredicted RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 S100GP29377 79 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 CHRNDQ07001 517 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 CLEC16AQ2KHT3 1053 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 HMBOX1Q6NT76 420 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 CRTC3Q6UUV7 619 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 GSDMCQ9BYG8 508 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 RMND5AQ9H871 391 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ANKARQ7Z5J8 1434 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 PAICSP22234 425 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 GPC1P35052 558 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 SNRPFP62306 86 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 NAB1Q13506 487 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 AGAP9Q5VTM2 703 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 PYHIN1Q6K0P9 492 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ARMC6Q6NXE6 501 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ARCQ7LC44 396 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 SRBD1Q8N5C6 995 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 ATPAF2Q8N5M1 289 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 CENPIQ92674 756 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms