RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ERAP1Q9NZ08 941 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 DTLQ9NZJ0 730 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 COX16Q9P0S2 106 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 MAGED2Q9UNF1 606 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-201ENST00000333371 HES2Q9Y543 173 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 SHROOM3Q8TF72 1996 aa12.7□□□□□ -0.38
VPS33B-201ENST00000333371 ARHGAP42A6NI28 874 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 PDGFRBP09619 1106 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 ZNF286BP0CG31 522 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 FGF3P11487 239 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-201ENST00000333371 P4HA1P13674 534 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 CCDC130P13994 396 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 CD1EP15812 388 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 MGAT1P26572 445 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 ADORA2BP29275 332 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 CPOXP36551 454 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 CACNA2D1P54289 1103 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 EPHB1P54762 984 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 TMEM62Q0P6H9 643 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 TUBB3Q13509 450 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 TEDDM1Q5T9Z0 273 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 FAM91A1Q658Y4 838 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 MBLAC2Q68D91 279 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 CCDC124Q96CT7 223 aaKnown RBP12.69□□□□□ -0.38
VPS33B-201ENST00000333371 MTBPQ96DY7 904 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 ZMAT2Q96NC0 199 aaKnown RBP12.69□□□□□ -0.38
VPS33B-201ENST00000333371 TSC22D3Q99576 134 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 ZNF212Q9UDV6 495 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 AP4E1Q9UPM8 1137 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 C2CD2Q9Y426 696 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 PLXNA1Q9UIW2 1896 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 A0A088AWK7 358 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 IQCA1LA6NCM1 817 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 MCF2P10911 925 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 ATICP31939 592 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 MAGEA6P43360 314 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 PITX1P78337 314 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-201ENST00000333371 PKDCCQ504Y2 493 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 LDLRAD1Q5T700 205 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 RAPH1Q70E73 1250 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 FAM131BQ86XD5 332 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 C10orf107Q8IVU9 208 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 TRIM42Q8IWZ5 723 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 ARHGAP24Q8N264 748 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 MCUQ8NE86 351 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 SLC35F5Q8WV83 523 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 C18orf25Q96B23 403 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-201ENST00000333371 CSPG4P5Q96PW8 444 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 ZNF670Q9BS34 389 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 VRTNQ9H8Y1 702 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 XPNPEP3Q9NQH7 507 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 MOCS1Q9NZB8 636 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 SEPT10Q9P0V9 454 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 TUBGCP4Q9UGJ1 667 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 A6NJR5 290 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 A8MXQ7 604 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 PDHXO00330 501 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 CIB2O75838 187 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-201ENST00000333371 PRKCGP05129 697 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 SLC1A6P48664 564 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 ACTR3P61158 418 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 RBP5P82980 135 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 LBRQ14739 615 aaKnown RBP12.69□□□□□ -0.38
VPS33B-201ENST00000333371 NCBP2-AS2Q69YL0 99 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 HEATR6Q6AI08 1181 aaKnown RBP12.69□□□□□ -0.38
VPS33B-201ENST00000333371 RNF111Q6ZNA4 994 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 CMC1Q7Z7K0 106 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 MYLK4Q86YV6 388 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-201ENST00000333371 CDKL3Q8IVW4 592 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-201ENST00000333371 HACE1Q8IYU2 909 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 AGR3Q8TD06 166 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 NLRP7Q8WX94 980 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 THAP1Q9NVV9 213 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 SCOCQ9UIL1 159 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 GJD2Q9UKL4 321 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 PACSIN3Q9UKS6 424 aa12.69□□□□□ -0.38
VPS33B-201ENST00000333371 PLXNB2O15031 1838 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 LOC100653049A0A140TA62 436 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 PPP1R12AO14974 1030 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-201ENST00000333371 MDM4O15151 490 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 GCATO75600 419 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 KRT34O76011 436 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 NPTXRO95502 500 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 SERPINA6P08185 405 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 ERVK-10P10266 1014 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 MLH1P40692 756 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 PGGT1BP53609 377 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 IRX1P78414 480 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-201ENST00000333371 LAMC2Q13753 1193 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 PCLAFQ15004 111 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 NET1Q7Z628 596 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-201ENST00000333371 TNS4Q8IZW8 715 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 OR6B3Q8NGW1 331 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 GATA6Q92908 595 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 AZIN2Q96A70 460 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 SLC4A5Q9BY07 1137 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 ASB7Q9H672 318 aa12.68□□□□□ -0.38
VPS33B-201ENST00000333371 MAN1C1Q9NR34 630 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms