RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 GFRA2O00451 464 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 TSPAN3O60637 253 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 F9P00740 461 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 SDC4P31431 198 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 SLC6A4P31645 630 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 RDXP35241 583 aaKnown RBP15.37■□□□□ 0.05
CLRN1-203ENST00000328863 TIE1P35590 1138 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 ZBED6P86452 979 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 DEUP1Q05D60 604 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 MESP2Q0VG99 397 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 EIF4EBP2Q13542 120 aaPredicted RBP15.37■□□□□ 0.05
CLRN1-203ENST00000328863 CDH18Q13634 790 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 DMC1Q14565 340 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 SLC25A52Q3SY17 297 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 MS4A13Q5J8X5 152 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 RABGAP1LQ5R372 815 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 PIK3R6Q5UE93 754 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 OTUD1Q5VV17 481 aaPredicted RBP15.37■□□□□ 0.05
CLRN1-203ENST00000328863 E4F1Q66K89 784 aaPredicted RBP15.37■□□□□ 0.05
CLRN1-203ENST00000328863 RAP1GAP2Q684P5 730 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 NADSYN1Q6IA69 706 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 DNAJC24Q6P3W2 148 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 WFIKKN2Q8TEU8 576 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 UCMAQ8WVF2 138 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 ATRIPQ8WXE1 791 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 SYN2Q92777 582 aaPredicted RBP15.37■□□□□ 0.05
CLRN1-203ENST00000328863 TMA16Q96EY4 203 aaKnown RBP15.37■□□□□ 0.05
CLRN1-203ENST00000328863 PGAP3Q96FM1 320 aaPredicted RBP15.37■□□□□ 0.05
CLRN1-203ENST00000328863 SYT11Q9BT88 431 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 HAUS4Q9H6D7 363 aa15.37■□□□□ 0.05
CLRN1-203ENST00000328863 LUC7L2Q9Y383 392 aaKnown RBP15.37■□□□□ 0.05
CLRN1-203ENST00000328863 BZW2Q9Y6E2 419 aaKnown RBP15.37■□□□□ 0.05
CLRN1-203ENST00000328863 MYO15AQ9UKN7 3530 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 MYO18AQ92614 2054 aaKnown RBP15.36■□□□□ 0.05
CLRN1-203ENST00000328863 K7ESF4 209 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 TBL1XO60907 577 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 APBB3O95704 486 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 GYPCP04921 128 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 TDGF1P13385 188 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 TACR2P21452 398 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 HOXA6P31267 233 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 KIR2DL1P43626 348 aaPredicted RBP15.36■□□□□ 0.05
CLRN1-203ENST00000328863 PTP4A2Q12974 167 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 SPECC1LQ69YQ0 1117 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 ACAD10Q6JQN1 1059 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 RFWD3Q6PCD5 774 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 MFN1Q8IWA4 741 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 AHI1Q8N157 1196 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 CAMKK1Q8N5S9 505 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 ALLCQ8N6M5 410 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 TXNDC5Q8NBS9 432 aaKnown RBP15.36■□□□□ 0.05
CLRN1-203ENST00000328863 TSTD1Q8NFU3 115 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 TRIM11Q96F44 468 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 HHIPQ96QV1 700 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 TBCBQ99426 244 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 SEMA4AQ9H3S1 761 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 PIGVQ9NUD9 493 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 TMEM59LQ9UK28 342 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 FBXO10Q9UK96 956 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 CAPN11Q9UMQ6 739 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 STARD13Q9Y3M8 1113 aa15.36■□□□□ 0.05
CLRN1-203ENST00000328863 NYNRINQ9P2P1 1898 aaKnown RBP15.35■□□□□ 0.05
CLRN1-203ENST00000328863 NPC1O15118 1278 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 TRIM24O15164 1050 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 ALDH1A2O94788 518 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 KLF8O95600 359 aaPredicted RBP15.35■□□□□ 0.05
CLRN1-203ENST00000328863 KRT3P12035 628 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
CLRN1-203ENST00000328863 SGSHP51688 502 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 GEN1Q17RS7 908 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 ACBD5Q5T8D3 534 aaPredicted RBP15.35■□□□□ 0.05
CLRN1-203ENST00000328863 SDE2Q6IQ49 451 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 ZNF571Q7Z3V5 609 aaPredicted RBP15.35■□□□□ 0.05
CLRN1-203ENST00000328863 LONP2Q86WA8 852 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 SFTPA1Q8IWL2 248 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 CHPFQ8IZ52 775 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 LGI2Q8N0V4 545 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 EMC1Q8N766 993 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 IL17RCQ8NAC3 791 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 ZBTB44Q8NCP5 570 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 NELL1Q92832 810 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 NKD2Q969F2 451 aaPredicted RBP15.35■□□□□ 0.05
CLRN1-203ENST00000328863 NT5C3BQ969T7 300 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 VCPIP1Q96JH7 1222 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 CFAP57Q96MR6 1250 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 WDCPQ9H6R7 721 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 POLMQ9NP87 494 aaPredicted RBP15.35■□□□□ 0.05
CLRN1-203ENST00000328863 XPO7Q9UIA9 1087 aaKnown RBP15.35■□□□□ 0.05
CLRN1-203ENST00000328863 R4GN57 208 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 EML5Q05BV3 1969 aa15.35■□□□□ 0.05
CLRN1-203ENST00000328863 CKAP5Q14008 2032 aa15.34■□□□□ 0.05
CLRN1-203ENST00000328863 CCDC163A0A0D9SF12 145 aa15.34■□□□□ 0.05
CLRN1-203ENST00000328863 GOLGA6L7A0A1B0GV03 622 aa15.34■□□□□ 0.05
CLRN1-203ENST00000328863 A0A1B0GVM2 712 aa15.34■□□□□ 0.05
CLRN1-203ENST00000328863 TCAF2A6NFQ2 919 aa15.34■□□□□ 0.05
CLRN1-203ENST00000328863 C2CD4BA6NLJ0 364 aa15.34■□□□□ 0.05
CLRN1-203ENST00000328863 TMCO5BA8MYB1 307 aa15.34■□□□□ 0.05
CLRN1-203ENST00000328863 PROB1E7EW31 1015 aa15.34■□□□□ 0.05
CLRN1-203ENST00000328863 LUC7L3O95232 432 aaKnown RBP15.34■□□□□ 0.05
CLRN1-203ENST00000328863 SERPING1P05155 500 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms