RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 CHRM1P11229 460 aaPredicted RBP15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 NTSR1P30989 418 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 SLC6A4P31645 630 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 CCR1P32246 355 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 NSFP46459 744 aaKnown RBP15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 FANCCQ00597 558 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 SIM2Q14190 667 aaPredicted RBP15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 E2F5Q15329 346 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 C2CD6Q53TS8 623 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 MPP7Q5T2T1 576 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 NADSYN1Q6IA69 706 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 ANO7Q6IWH7 933 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 MMS22LQ6ZRQ5 1243 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 CCDC117Q8IWD4 279 aaPredicted RBP15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 ZNF557Q8N988 423 aaPredicted RBP15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 EBF1Q9UH73 591 aa15.21■□□□□ 0.03
TUBA3D-201ENST00000321253 RIF1Q5UIP0 2472 aaKnown RBP15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 M0QYT0 321 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 HRO43593 1189 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 ADAM23O75077 832 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 RPP40O75818 363 aaKnown RBP15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 HOXB2P14652 356 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 MMP8P22894 467 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 SGSHP51688 502 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 SRSF5Q13243 272 aaKnown RBP15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 MTA1Q13330 715 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 NR1I3Q14994 352 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 EIF4HQ15056 248 aaKnown RBP15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 GEN1Q17RS7 908 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 TMEM92Q6UXU6 159 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 SND1Q7KZF4 910 aaKnown RBP eCLIP15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 CHSY1Q86X52 802 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 SUMF1Q8NBK3 374 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 SLC30A5Q8TAD4 765 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 AGPAT1Q99943 283 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 CIPCQ9C0C6 399 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 NUCKS1Q9H1E3 243 aaKnown RBP15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 STIM2Q9P246 746 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 BCCIPQ9P287 314 aaKnown RBP eCLIP15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 CLEC4EQ9ULY5 219 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 DMDP11532 3685 aa15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 MYO18AQ92614 2054 aaKnown RBP15.2■□□□□ 0.02
TUBA3D-201ENST00000321253 LRRC53A6NM62 1247 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 KCNU1A8MYU2 1149 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 ZBTB24O43167 697 aaPredicted RBP15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 WASP42768 502 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 SULT1E1P49888 294 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 UBASH3AP57075 661 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 EIF4EBP2Q13542 120 aaPredicted RBP15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 CLEC16AQ2KHT3 1053 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 MS4A13Q5J8X5 152 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 RAP1GAP2Q684P5 730 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 MFN1Q8IWA4 741 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 LGI2Q8N0V4 545 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 WFIKKN2Q8TEU8 576 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 GAB3Q8WWW8 586 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 BAP1Q92560 729 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 RUBCNQ92622 972 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 PRICKLE1Q96MT3 831 aaPredicted RBP15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 C11orf70Q9BRQ4 267 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 ABCB8Q9NUT2 735 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 TMEM51Q9NW97 253 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 NCDNQ9UBB6 729 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 XPO7Q9UIA9 1087 aaKnown RBP15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 PAXBP1Q9Y5B6 917 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 USP34Q70CQ2 3546 aa15.19■□□□□ 0.02
TUBA3D-201ENST00000321253 FAM186AA6NE01 2351 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 TCRBV21S2A2A0A5A6 115 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 F5H5T6 163 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 NPC1O15118 1278 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 TIMM44O43615 452 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 F9P00740 461 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 UNGP13051 313 aaPredicted RBP15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 HNRNPLP14866 589 aaKnown RBP eCLIP15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 TACR2P21452 398 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 RPS24P62847 133 aaKnown RBP15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 CENPCQ03188 943 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 DEUP1Q05D60 604 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 CDH18Q13634 790 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 ASIC2Q16515 512 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 LPAL2Q16609 132 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 SLC25A52Q3SY17 297 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 AHI1Q8N157 1196 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 PGBD3Q8N328 593 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 MDGA1Q8NFP4 955 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 PCDHB18PQ96TA0 734 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 ACOX2Q99424 681 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 NPY6RQ99463 290 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 TPSD1Q9BZJ3 242 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 TSPY26PQ9H489 355 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 METTL5Q9NRN9 209 aaKnown RBP15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 ELOVL2Q9NXB9 296 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 CACNA2D2Q9NY47 1150 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 ADAM22Q9P0K1 906 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 GGA2Q9UJY4 613 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 GMEB2Q9UKD1 530 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 HCN2Q9UL51 889 aa15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 PTPRZ1P23471 2315 aaPredicted RBP15.18■□□□□ 0.02
TUBA3D-201ENST00000321253 CALB1P05937 261 aa15.17■□□□□ 0.02
TUBA3D-201ENST00000321253 PABPC1P11940 636 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms