RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 NUDT5Q9UKK9 219 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 DERAQ9Y315 318 aa13.78□□□□□ -0.2
PCDHB9-201ENST00000316105 GOLGA8TH3BQL2 631 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 TREHO43280 583 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 KPNA6O60684 536 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 ITGA9Q13797 1035 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 RCN1Q15293 331 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 FAM110CQ1W6H9 321 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 RNF43Q68DV7 783 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 IL31Q6EBC2 164 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 MAML3Q96JK9 1138 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 FICDQ9BVA6 458 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 DMAP1Q9NPF5 467 aaPredicted RBP13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 WDR70Q9NW82 654 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 LGALS13Q9UHV8 139 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 DSEQ9UL01 958 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 IPPQ9Y573 584 aa13.77□□□□□ -0.2
PCDHB9-201ENST00000316105 ENO3P13929 434 aaPredicted RBP13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 TSHRP16473 764 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 ABCG1P45844 678 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 NRLP54845 237 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 FAM182AQ5T1J6 154 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 RNF180Q86T96 592 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 OR52K1Q8NGK4 314 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 TEKT4Q8WW24 435 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 ZFP42Q96MM3 310 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 EBNA1BP2Q99848 306 aaKnown RBP13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 C12orf65Q9H3J6 166 aaKnown RBP13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 RBM22Q9NW64 420 aaKnown RBP eCLIP13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 RRN3Q9NYV6 651 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 TSR3Q9UJK0 312 aaKnown RBP13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 SMIM35A0A1B0GVV1 85 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 MANSC4A6NHS7 340 aaPredicted RBP13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 NVLO15381 856 aaKnown RBP13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 UNC5CO95185 931 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 CRYBB1P53674 252 aaPredicted RBP13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 CDK16Q00536 496 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 PARP6Q2NL67 630 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 NIPA2Q8N8Q9 360 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 SLC35B2Q8TB61 432 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 CALML6Q8TD86 181 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 PPP1R2P1Q96PQ5 205 aa13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 ILKAPQ9H0C8 392 aaPredicted RBP13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 ATXN2Q99700 1313 aaKnown RBP13.77□□□□□ -0.21
PCDHB9-201ENST00000316105 DNM1LO00429 736 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 EDF1O60869 148 aaKnown RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 GFAPP14136 432 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 COPAP53621 1224 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 POLE2P56282 527 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 IRX1P78414 480 aaPredicted RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 GHRHRQ02643 423 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 EFEMP1Q12805 493 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 LRRC23Q53EV4 343 aaPredicted RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 HABP4Q5JVS0 413 aaKnown RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 OTOAQ7RTW8 1153 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 TMEM86AQ8N2M4 240 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 DNAJC9Q8WXX5 260 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 MCRS1Q96EZ8 462 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 OXNAD1Q96HP4 312 aaPredicted RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 CSPG4P5Q96PW8 444 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 OR12D3Q9UGF7 316 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 CCR1P32246 355 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 MRPS5P82675 430 aaKnown RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 SOCS4Q8WXH5 440 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 SH3GL3Q99963 347 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 HAPLN2Q9GZV7 340 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 PDLIM7Q9NR12 457 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 CHST12Q9NRB3 414 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 PAPSS1O43252 624 aaPredicted RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 UPP2O95045 317 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 ERCC2P18074 760 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 GRK2P25098 689 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 CDH17Q12864 832 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 TSPAN17Q96FV3 270 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 TSC22D3Q99576 134 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 DUSP16Q9BY84 665 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 UPF3AQ9H1J1 476 aaKnown RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 SIX4Q9UIU6 781 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 ST3GAL5Q9UNP4 418 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 XPO1O14980 1071 aaKnown RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 SNX2O60749 519 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 DGKIO75912 1065 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 SLC2A3P11169 496 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 VSTM1Q6UX27 236 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 KCNMB4Q86W47 210 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 SUGP1Q8IWZ8 645 aaKnown RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 FBXO32Q969P5 355 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 ADAM2Q99965 735 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 LPIN3Q9BQK8 851 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 UNKQ9C0B0 810 aaKnown RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 ATXN3LQ9H3M9 355 aa13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 RUVBL2Q9Y230 463 aaKnown RBP13.76□□□□□ -0.21
PCDHB9-201ENST00000316105 E5RI56 91 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 NOL3O60936 208 aaKnown RBP13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 TMEM63AO94886 807 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 MRPS6P82932 125 aaKnown RBP13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 TFAP2DQ7Z6R9 452 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 DDIASQ8IXT1 998 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms