RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 SLFN11Q7Z7L1 901 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 LRRC6Q86X45 466 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 FAM120BQ96EK7 910 aaKnown RBP13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 CCSER1Q9C0I3 900 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 AVILO75366 819 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 GLP2RO95838 553 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 FAM98BQ52LJ0 330 aaKnown RBP13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 SLC22A9Q8IVM8 553 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 FAM129BQ96TA1 746 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 DRG1Q9Y295 367 aaKnown RBP13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 CYB561D2O14569 222 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 BCL10O95999 233 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 ACAD10Q6JQN1 1059 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 MTA3Q9BTC8 594 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 NOD2Q9HC29 1040 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 EFCAB10A6NFE3 127 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 MED26O95402 600 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 PTPN9P43378 593 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 RXRGP48443 463 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 PPIL2Q13356 520 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 ALX1Q15699 326 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 KCNT1Q5JUK3 1230 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 FAXCQ5TGI0 409 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 PARGQ86W56 976 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 CYLDQ9NQC7 956 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 ENOPH1Q9UHY7 261 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 ALG6Q9Y672 507 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 TCEA3O75764 348 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 CYP2C8P10632 490 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 CYP2A6P11509 494 aaPredicted RBP13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 TLX1P31314 330 aaPredicted RBP13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 TAB1Q15750 504 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 SVOPQ8N4V2 548 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 ARIH1Q9Y4X5 557 aaPredicted RBP13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 A0A1B0GTH6 734 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 SLC12A8A0AV02 714 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 KPNA3O00505 521 aaPredicted RBP13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 HPCAL1P37235 193 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 NR6A1Q15406 480 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 PEX5LQ8IYB4 626 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 DAPK2Q9UIK4 370 aa13.16□□□□□ -0.3
SPTBN2-201ENST00000309996 MAGEB3O15480 346 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 BAIAP3O94812 1187 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 CPA3P15088 417 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 RAB2AP61019 212 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 FGD3Q5JSP0 725 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 REPS1Q96D71 796 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 CAB39LQ9H9S4 337 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 UGGT1Q9NYU2 1555 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 TSPAN9O75954 239 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 ITIH4Q14624 930 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 HPS6Q86YV9 775 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 SMYD1Q8NB12 490 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 PJA1Q8NG27 643 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 CXorf40AQ8TE69 158 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 WDR60Q8WVS4 1066 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 FIG4Q92562 907 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 PMM1Q92871 262 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 BDH2Q9BUT1 245 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 LYVE1Q9Y5Y7 322 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 SLCO1B7G3V0H7 640 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 SNAP23O00161 211 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 PTSQ03393 145 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 MTAPQ13126 283 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 BOP1Q14137 746 aaKnown RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 SPPL2AQ8TCT8 520 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 KCNB2Q92953 911 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 STK39Q9UEW8 545 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 RFX7Q2KHR2 1363 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 CNTFP26441 200 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 POLR2LP62875 67 aaKnown RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 NAA30Q147X3 362 aaPredicted RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 BOLA3Q53S33 107 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 OLFML2AQ68BL7 652 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 ZBTB49Q6ZSB9 765 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 TRAPPC5Q8IUR0 188 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 CCNJLQ8IV13 435 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 CELF1Q92879 486 aaKnown RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 APOL4Q9BPW4 351 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 SLC35C2Q9NQQ7 365 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 CHKBQ9Y259 395 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 CASTOR2A6NHX0 329 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 H2AFXP16104 143 aaPredicted RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 CALB2P22676 271 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 ATP5F1P24539 256 aaPredicted RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 PSMD4P55036 377 aaKnown RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 ITGA1P56199 1179 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 USP38Q8NB14 1042 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 OR10H1Q9Y4A9 318 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 KHDRBS3O75525 346 aaKnown RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 EIF2B2P49770 351 aaKnown RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 COL23A1Q86Y22 540 aaPredicted RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 SP8Q8IXZ3 490 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 NMD3Q96D46 503 aaKnown RBP13.15□□□□□ -0.3
SPTBN2-201ENST00000309996 GMFGO60234 142 aa13.15□□□□□ -0.31
SPTBN2-201ENST00000309996 CDC40O60508 579 aaKnown RBP eCLIP13.15□□□□□ -0.31
SPTBN2-201ENST00000309996 TSPAN3O60637 253 aa13.15□□□□□ -0.31
SPTBN2-201ENST00000309996 TRIM3O75382 744 aaPredicted RBP13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms