RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TRIP13Q15645 432 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 ARHGAP15Q53QZ3 475 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 BNC2Q6ZN30 1099 aaPredicted RBP4.12□□□□□ -1.75
USH2A-201ENST00000307340 SLFN11Q7Z7L1 901 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 TUBA1CQ9BQE3 449 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 GDAQ9Y2T3 454 aa4.12□□□□□ -1.75
USH2A-201ENST00000307340 C5orf58C9J3I9 102 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 M0R2C6 588 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 TOP3BO95985 862 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 MYCLP12524 364 aaPredicted RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 RNH1P13489 461 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 PGAM1P18669 254 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 EIF3EP60228 445 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 TCEAL1Q15170 157 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 NKAPQ8N5F7 415 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 SPDYE1Q8NFV5 336 aaPredicted RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 CSGALNACT1Q8TDX6 532 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 ZNF473Q8WTR7 871 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 OSBPL2Q9H1P3 480 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 WARS2Q9UGM6 360 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 GPIP06744 558 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 VDRP11473 427 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 CCR1P32246 355 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 YWHAHQ04917 246 aaPredicted RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 SLC39A6Q13433 755 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 FASTKD1Q53R41 847 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 ZNF720Q7Z2F6 126 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 ECSITQ9BQ95 431 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 TAGLN3Q9UI15 199 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 NOVA2Q9UNW9 492 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 PCDHB6Q9Y5E3 794 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 SHROOM3Q8TF72 1996 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 PLCH1Q4KWH8 1693 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 TMEM120BA0PK00 339 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 NBPF26B4DH59 902 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 BAG2O95816 211 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 FCHO2Q0JRZ9 810 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 WDR72Q3MJ13 1102 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 SCYL2Q6P3W7 929 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 ANKMY2Q8IV38 441 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 TAGAPQ8N103 731 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 NUP93Q8N1F7 819 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 SDR42E1Q8WUS8 393 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 VMP1Q96GC9 406 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 BTBD10Q9BSF8 475 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 TSEN34Q9BSV6 310 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 SEC24BO95487 1268 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 ZNF24P17028 368 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 CUL2Q13617 745 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 ERLEC1Q96DZ1 483 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 CRELD1Q96HD1 420 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 APOL2Q9BQE5 337 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 SENP6Q9GZR1 1112 aaPredicted RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 ACOT9Q9Y305 439 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 TMED5Q9Y3A6 229 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 PCDHGA2Q9Y5H1 932 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 EVPLQ92817 2033 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 SIGLEC1Q9BZZ2 1709 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 ASTN1O14525 1302 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 MAGEB3O15480 346 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 LZTS3O60299 673 aaPredicted RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 ARHGEF15O94989 841 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 CCNDBP1O95273 360 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 ITGAXP20702 1163 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 CYP2A7P20853 494 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 LIG3P49916 1009 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 BNIPLQ7Z465 357 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 SCUBE1Q8IWY4 988 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 SPOCK2Q92563 424 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 C8orf37Q96NL8 207 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 AP4E1Q9UPM8 1137 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 FAM50BQ9Y247 325 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 CFLARO15519 480 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 CCDC166P0CW27 439 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 RAB2AP61019 212 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 BST2Q10589 180 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 NDUFA9Q16795 377 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 ATP13A4Q4VNC1 1196 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 BRMS1LQ5PSV4 323 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 FAM182AQ5T1J6 154 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 KLHL23Q8NBE8 558 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 SLC44A5Q8NCS7 719 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 APOPT1Q96IL0 206 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 TCF7L2Q9NQB0 619 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 PCDHGB7Q9Y5F8 929 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 FAM58BPP0C7Q3 252 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 CYP3A5P20815 502 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 GP5P40197 560 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 ALDH9A1P49189 494 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 PRMT2P55345 433 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 MVKQ03426 396 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 KCNMA1Q12791 1236 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 CHST3Q7LGC8 479 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 OOSP2Q86WS3 158 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 TADA2AO75478 443 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 ERP29P30040 261 aaKnown RBP4.11□□□□□ -1.75
USH2A-201ENST00000307340 TRAM1Q15629 374 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 GPR158Q5T848 1215 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 PLEKHA8Q96JA3 519 aa4.11□□□□□ -1.75
USH2A-201ENST00000307340 MRPL57Q9BQC6 102 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms