RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PABPC3Q9H361 631 aaKnown RBP23.6■■□□□ 1.37
PTX3-201ENST00000295927 SEMA4AQ9H3S1 761 aa23.6■■□□□ 1.37
PTX3-201ENST00000295927 CYP4F11Q9HBI6 524 aa23.6■■□□□ 1.37
PTX3-201ENST00000295927 KCNU1A8MYU2 1149 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 H0YGN5 161 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 NDC80O14777 642 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 FGF18O76093 207 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 TBX18O95935 607 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 ZDHHC11BP0C7U3 371 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 PSRC1Q6PGN9 363 aaPredicted RBP23.59■■□□□ 1.37
PTX3-201ENST00000295927 PCGF5Q86SE9 256 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 ZCCHC9Q8N567 271 aaKnown RBP23.59■■□□□ 1.37
PTX3-201ENST00000295927 TAB3Q8N5C8 712 aaPredicted RBP23.59■■□□□ 1.37
PTX3-201ENST00000295927 NETO2Q8NC67 525 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 SLC39A13Q96H72 371 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 SH3GL2Q99962 352 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 MRPL17Q9NRX2 175 aaKnown RBP23.59■■□□□ 1.37
PTX3-201ENST00000295927 OLA1Q9NTK5 396 aaKnown RBP23.59■■□□□ 1.37
PTX3-201ENST00000295927 DNAJC17Q9NVM6 304 aaKnown RBP23.59■■□□□ 1.37
PTX3-201ENST00000295927 TMEM51Q9NW97 253 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 FARP1Q9Y4F1 1045 aaPredicted RBP23.59■■□□□ 1.37
PTX3-201ENST00000295927 INSL6Q9Y581 213 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 NFS1Q9Y697 457 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 HACD1B0YJ81 288 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 FAM182AQ5T1J6 154 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 LRIG3Q6UXM1 1119 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 FOXP3Q9BZS1 431 aa23.59■■□□□ 1.37
PTX3-201ENST00000295927 UBE2OQ9C0C9 1292 aaKnown RBP23.59■■□□□ 1.37
PTX3-201ENST00000295927 EPHB2P29323 1055 aa23.58■■□□□ 1.37
PTX3-201ENST00000295927 TBX4P57082 545 aa23.58■■□□□ 1.37
PTX3-201ENST00000295927 C10orf120Q5SQS8 335 aa23.58■■□□□ 1.37
PTX3-201ENST00000295927 PPIL6Q8IXY8 311 aa23.58■■□□□ 1.37
PTX3-201ENST00000295927 OR2W6PQ8NHA6 318 aa23.58■■□□□ 1.37
PTX3-201ENST00000295927 TFB1MQ8WVM0 346 aaKnown RBP23.58■■□□□ 1.37
PTX3-201ENST00000295927 CPT1BQ92523 772 aa23.58■■□□□ 1.37
PTX3-201ENST00000295927 FCRL2Q96LA5 508 aaPredicted RBP23.58■■□□□ 1.37
PTX3-201ENST00000295927 SHOC2Q9UQ13 582 aa23.58■■□□□ 1.37
PTX3-201ENST00000295927 PLXNA4Q9HCM2 1894 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 OPA1O60313 960 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 MOCS2O96007 188 aaPredicted RBP23.57■■□□□ 1.36
PTX3-201ENST00000295927 SRGAP2BP0DMP2 458 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 SYN1P17600 705 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 ACTN2P35609 894 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 UBAP2Q5T6F2 1119 aaKnown RBP23.57■■□□□ 1.36
PTX3-201ENST00000295927 PRCCQ92733 491 aaPredicted RBP23.57■■□□□ 1.36
PTX3-201ENST00000295927 CLP1Q92989 425 aaKnown RBP23.57■■□□□ 1.36
PTX3-201ENST00000295927 LGMNQ99538 433 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 CDC42EP4Q9H3Q1 356 aaKnown RBP23.57■■□□□ 1.36
PTX3-201ENST00000295927 PAK5Q9P286 719 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 XPO7Q9UIA9 1087 aaKnown RBP23.57■■□□□ 1.36
PTX3-201ENST00000295927 YIPF1Q9Y548 306 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.57■■□□□ 1.36
PTX3-201ENST00000295927 LILRB3O75022 631 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 HEATR6Q6AI08 1181 aaKnown RBP23.57■■□□□ 1.36
PTX3-201ENST00000295927 PDZD4Q76G19 769 aaPredicted RBP23.57■■□□□ 1.36
PTX3-201ENST00000295927 HERC6Q8IVU3 1022 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 TP53INP2Q8IXH6 220 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 GPR65Q8IYL9 337 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 NAT8LQ8N9F0 302 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 ZBP1Q9H171 429 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 CCSER2Q9H7U1 834 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.57■■□□□ 1.36
PTX3-201ENST00000295927 MARCH2Q9P0N8 246 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 FNIP2Q9P278 1114 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 STK39Q9UEW8 545 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 NEU3Q9UQ49 428 aa23.57■■□□□ 1.36
PTX3-201ENST00000295927 SLC2A3P11169 496 aa23.56■■□□□ 1.36
PTX3-201ENST00000295927 VAV1P15498 845 aa23.56■■□□□ 1.36
PTX3-201ENST00000295927 HMGA1P17096 107 aaKnown RBP23.56■■□□□ 1.36
PTX3-201ENST00000295927 ALDH1A3P47895 512 aa23.56■■□□□ 1.36
PTX3-201ENST00000295927 PDK1Q15118 436 aa23.56■■□□□ 1.36
PTX3-201ENST00000295927 TRIP4Q15650 581 aaPredicted RBP23.56■■□□□ 1.36
PTX3-201ENST00000295927 ANKRD22Q5VYY1 191 aa23.56■■□□□ 1.36
PTX3-201ENST00000295927 TRMT10CQ7L0Y3 403 aaKnown RBP23.56■■□□□ 1.36
PTX3-201ENST00000295927 MIB1Q86YT6 1006 aa23.56■■□□□ 1.36
PTX3-201ENST00000295927 SLC4A7Q9Y6M7 1214 aa23.56■■□□□ 1.36
PTX3-201ENST00000295927 TEX28O15482 410 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 RIPK2O43353 540 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 TLR5O60602 858 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 CSH1P0DML2 217 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 CSH2P0DML3 217 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 BASP1P80723 227 aaKnown RBP23.55■■□□□ 1.36
PTX3-201ENST00000295927 SLC29A2Q14542 456 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 PRKD1Q15139 912 aaPredicted RBP23.55■■□□□ 1.36
PTX3-201ENST00000295927 MANEALQ5VSG8 457 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 DENND2CQ68D51 928 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 RWDD4Q6NW29 188 aaKnown RBP23.55■■□□□ 1.36
PTX3-201ENST00000295927 HOOK3Q86VS8 718 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 NPWQ8N729 165 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 GOLGA6L1Q8N7Z2 621 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 KLHL23Q8NBE8 558 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 CCDC110Q8TBZ0 833 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 HERVK_113Q902F9 699 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 RBM15Q96T37 977 aaKnown RBP eCLIP23.55■■□□□ 1.36
PTX3-201ENST00000295927 RAD9AQ99638 391 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 PRDM12Q9H4Q4 367 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 NR2E3Q9Y5X4 410 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 RAD54BQ9Y620 910 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 HS3ST4Q9Y661 456 aa23.55■■□□□ 1.36
PTX3-201ENST00000295927 NUP205Q92621 2012 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms