RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 LATS2Q9NRM7 1088 aa8.59□□□□□ -1.03
CACNA1D-201ENST00000288139 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.59□□□□□ -1.03
CACNA1D-201ENST00000288139 PCDHA6Q9UN73 950 aa8.59□□□□□ -1.03
CACNA1D-201ENST00000288139 PCDHA8Q9Y5H6 950 aa8.59□□□□□ -1.03
CACNA1D-201ENST00000288139 SCN3AQ9NY46 2000 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 LOC102724428A0A0B4J2F2 783 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 BBIP1A8MTZ0 92 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 TRIM49D1C9J1S8 452 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 DNAJB1P25685 340 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 GCLMP48507 274 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 SIK1P57059 783 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 ZNF543Q08ER8 600 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 MYO7BQ6PIF6 2116 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 CDH24Q86UP0 819 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 SLC38A7Q9NVC3 462 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 SLC12A4Q9UP95 1085 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 NCKAP1Q9Y2A7 1128 aa8.59□□□□□ -1.04
CACNA1D-201ENST00000288139 NALCNQ8IZF0 1738 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 hCG_1642624A0A1W2PR95 340 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PLEKHA8P1O95397 391 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 GLI1P08151 1106 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CLUP10909 449 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PSMD4P55036 377 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PAFAH2Q99487 392 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 NGRNQ9NPE2 291 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 SPASTQ9UBP0 616 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PCDHA3Q9Y5H8 950 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CCDC154A6NI56 674 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 SEMA3DO95025 777 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 A1BGP04217 495 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 HADHBP55084 474 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CCNYL1Q8N7R7 359 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PTCD3Q96EY7 689 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 EHD4Q9H223 541 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CD248Q9HCU0 757 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PRDM5Q9NQX1 630 aaPredicted RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 UBP1Q9NZI7 540 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CRNNQ9UBG3 495 aaPredicted RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 VPS51Q9UID3 782 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 AAR2Q9Y312 384 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CAPN6Q9Y6Q1 641 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PDZK1P1A8MUH7 402 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CTDNEP1O95476 244 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 ITGAVP06756 1048 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 APRTP07741 180 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CRABP2P29373 138 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CLK3P49761 638 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 HLA-DQA1Q5Y7H0 255 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CDC73Q6P1J9 531 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 RPTNQ6XPR3 784 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 GSPT2Q8IYD1 628 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 SCAIQ8N9R8 606 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 OR6P1Q8NGX9 317 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 ATP8B4Q8TF62 1192 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 HEY2Q9UBP5 337 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 UBA6A0AVT1 1052 aaPredicted RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PLK4O00444 970 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 SOAT2O75908 522 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 EPN2O95208 641 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 MGAT5Q09328 741 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 RRP1BQ14684 758 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 RIN2Q8WYP3 895 aaPredicted RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 IRGMA1A4Y4 181 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PSMD11O00231 422 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 TMCC2O75069 709 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 C7P10643 843 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 TARSP26639 723 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 FEN1P39748 380 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 NFIL3Q16649 462 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 BROXQ5VW32 411 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CWF19L1Q69YN2 538 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 FEZF2Q8TBJ5 459 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 RORBQ92753 470 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 RBAKQ9NYW8 714 aaPredicted RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 GYG1P46976 350 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PRIM2P49643 509 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 RTP1P59025 263 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PTGES3Q15185 160 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 NTRK3Q16288 839 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 LONRF1Q17RB8 773 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 FAM98BQ52LJ0 330 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 DGKKQ5KSL6 1271 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CYP4A22Q5TCH4 519 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 KCNV2Q8TDN2 545 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 ACSBG1Q96GR2 724 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PURBQ96QR8 312 aaKnown RBP8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 DSN1Q9H410 356 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 RMND5AQ9H871 391 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 LNPEPQ9UIQ6 1025 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 TMED5Q9Y3A6 229 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 PKP3Q9Y446 797 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 NCK2O43639 380 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 SOAT1P35610 550 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 CASP5P51878 434 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 RBP5P82980 135 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 POU5F1BQ06416 359 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 XKRXQ6PP77 449 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 C16orf86Q6ZW13 317 aa8.58□□□□□ -1.04
CACNA1D-201ENST00000288139 OTOAQ7RTW8 1153 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms