RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 GOLGA8RI6L899 631 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 GDF10P55107 478 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 GAD2Q05329 585 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 RCN2Q14257 317 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 OR52E8Q6IFG1 317 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 NPNTQ6UXI9 565 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 RINLQ6ZS11 566 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 RFX6Q8HWS3 928 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 PDIK1LQ8N165 341 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 ANKRD52Q8NB46 1076 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 CD99L2Q8TCZ2 262 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 FAM172AQ8WUF8 416 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 TAS2R1Q9NYW7 299 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 I3L4J1 428 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 ALDH1A1P00352 501 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 CDH6P55285 790 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 SLC18A2Q05940 514 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 BST2Q10589 180 aaKnown RBP18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 LIMS2Q7Z4I7 341 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 B3GALNT2Q8NCR0 500 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 CMASQ8NFW8 434 aaPredicted RBP18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 CAPNS2Q96L46 248 aa18.91■□□□□ 0.62
PDLIM3-201ENST00000284767 KLF11O14901 512 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 TBX10O75333 385 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 SNUPNO95149 360 aaKnown RBP18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 POMCP01189 267 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 LRPAP1P30533 357 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 ROR2Q01974 943 aaKnown RBP18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 NOGQ13253 232 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 CA9Q16790 459 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 ZFAND2BQ8WV99 257 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 RSAD2Q8WXG1 361 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 IFT43Q96FT9 208 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 OXNAD1Q96HP4 312 aaPredicted RBP18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 TRAPPC9Q96Q05 1148 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 KLF6Q99612 283 aaPredicted RBP18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 C12orf65Q9H3J6 166 aaKnown RBP18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 FBXO6Q9NRD1 293 aaPredicted RBP18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 MAP3K6O95382 1288 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 RPL22P35268 128 aaKnown RBP18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 CWF19L1Q69YN2 538 aaKnown RBP18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 GALNT15Q8N3T1 639 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 LRRN4Q8WUT4 740 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 UCMAQ8WVF2 138 aa18.9■□□□□ 0.62
PDLIM3-201ENST00000284767 THP07101 528 aa18.89■□□□□ 0.62
PDLIM3-201ENST00000284767 RAP1GDS1P52306 607 aa18.89■□□□□ 0.62
PDLIM3-201ENST00000284767 BCAT1P54687 386 aa18.89■□□□□ 0.62
PDLIM3-201ENST00000284767 PAQR9Q6ZVX9 377 aa18.89■□□□□ 0.62
PDLIM3-201ENST00000284767 BBS12Q6ZW61 710 aa18.89■□□□□ 0.62
PDLIM3-201ENST00000284767 HHIPL1Q96JK4 782 aa18.89■□□□□ 0.62
PDLIM3-201ENST00000284767 SENP8Q96LD8 212 aa18.89■□□□□ 0.62
PDLIM3-201ENST00000284767 ALG13Q9NP73 1137 aaKnown RBP18.89■□□□□ 0.62
PDLIM3-201ENST00000284767 IKBKGQ9Y6K9 419 aa18.89■□□□□ 0.62
PDLIM3-201ENST00000284767 MAP3K7O43318 606 aa18.89■□□□□ 0.61
PDLIM3-201ENST00000284767 PRPSAP2O60256 369 aa18.89■□□□□ 0.61
PDLIM3-201ENST00000284767 MAGEC1O60732 1142 aa18.89■□□□□ 0.61
PDLIM3-201ENST00000284767 SDC4P31431 198 aa18.89■□□□□ 0.61
PDLIM3-201ENST00000284767 PTK7Q13308 1070 aa18.89■□□□□ 0.61
PDLIM3-201ENST00000284767 BBS9Q3SYG4 887 aa18.89■□□□□ 0.61
PDLIM3-201ENST00000284767 HASPINQ8TF76 798 aa18.89■□□□□ 0.61
PDLIM3-201ENST00000284767 WDR60Q8WVS4 1066 aa18.89■□□□□ 0.61
PDLIM3-201ENST00000284767 XPO7Q9UIA9 1087 aaKnown RBP18.89■□□□□ 0.61
PDLIM3-201ENST00000284767 MAGEA13PA6NCF6 341 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 F8W8V4 182 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 FCHO1O14526 889 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 SETSIPP0DME0 302 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 HDAC4P56524 1084 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 ITGA7Q13683 1181 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 LPIN1Q14693 890 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 TAZQ16635 292 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 GSTA3Q16772 222 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 MDH1BQ5I0G3 518 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 PIGZQ86VD9 579 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 ZC3H18Q86VM9 953 aaKnown RBP18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 PDCD7Q8N8D1 485 aaKnown RBP18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 PRR11Q96HE9 360 aaPredicted RBP18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 FAM111AQ96PZ2 611 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 NOD1Q9Y239 953 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 GPR182O15218 404 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 TMEM63AO94886 807 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 BGNP21810 368 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 WARSP23381 471 aaKnown RBP18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 PGM1P36871 562 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 NDUFV1P49821 464 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 DPYSL3Q14195 570 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 ACAP1Q15027 740 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 SH2D5Q6ZV89 423 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 CTU1Q7Z7A3 348 aaKnown RBP18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 TOP6BLQ8N6T0 577 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 SLC44A1Q8WWI5 657 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 DDX43Q9NXZ2 648 aaKnown RBP18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 ANGPTL2Q9UKU9 493 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 INPP5FQ9Y2H2 1132 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 SPAG6O75602 509 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 PIAS1O75925 651 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 MYL2P10916 166 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 PTPN1P18031 435 aaKnown RBP18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 NKX3-2P78367 333 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 ADIGQ0VDE8 80 aa18.88■□□□□ 0.61
PDLIM3-201ENST00000284767 MTM1Q13496 603 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms