RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 DMAP1Q9NPF5 467 aaPredicted RBP21.67■■□□□ 1.06
YBX3-202ENST00000279550 ABI2Q9NYB9 513 aaPredicted RBP21.67■■□□□ 1.06
YBX3-202ENST00000279550 DTLQ9NZJ0 730 aa21.67■■□□□ 1.06
YBX3-202ENST00000279550 XPO7Q9UIA9 1087 aaKnown RBP21.67■■□□□ 1.06
YBX3-202ENST00000279550 ZNF638Q14966 1978 aaKnown RBP21.67■■□□□ 1.06
YBX3-202ENST00000279550 CLUHO75153 1309 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 CFAP69A5D8W1 941 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 CAPN9O14815 690 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 CPB1P15086 417 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 ZFXP17010 805 aaPredicted RBP21.66■■□□□ 1.06
YBX3-202ENST00000279550 ARL4AP40617 200 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 MAGEA10P43363 369 aaPredicted RBP21.66■■□□□ 1.06
YBX3-202ENST00000279550 GPX6P59796 221 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 MTM1Q13496 603 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 STAT4Q14765 748 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 SYCP2LQ5T4T6 812 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 EXOC3L1Q86VI1 746 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 CDKL3Q8IVW4 592 aaPredicted RBP21.66■■□□□ 1.06
YBX3-202ENST00000279550 NETO2Q8NC67 525 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 TTC25Q96NG3 672 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 QKIQ96PU8 341 aaKnown RBP eCLIP21.66■■□□□ 1.06
YBX3-202ENST00000279550 SELENOSQ9BQE4 189 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 MTRRQ9UBK8 725 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 LGALS13Q9UHV8 139 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 PATJQ8NI35 1801 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 KIAA1671Q9BY89 1806 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 A0A087WUV0 522 aaPredicted RBP21.66■■□□□ 1.06
YBX3-202ENST00000279550 LCHNA4D1U4 455 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 E7ESA3 106 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 NCAM1P13591 858 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 GCAP28676 217 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 DSG1Q02413 1049 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 PSMD5Q16401 504 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 SLC45A4Q5BKX6 768 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 C9orf50Q5SZB4 431 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 FAXCQ5TGI0 409 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 PM20D1Q6GTS8 502 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 FBXO22Q8NEZ5 403 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 HERC2P3Q9BVR0 1158 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 STMN4Q9H169 189 aaPredicted RBP21.66■■□□□ 1.06
YBX3-202ENST00000279550 EURLQ9NYK6 297 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 PAK5Q9P286 719 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 RCOR3Q9P2K3 495 aaPredicted RBP21.66■■□□□ 1.06
YBX3-202ENST00000279550 CDY1Q9Y6F8 540 aa21.66■■□□□ 1.06
YBX3-202ENST00000279550 FAM72CH0Y354 149 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 H3BRJ5 948 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 C2CD2LO14523 706 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 MFSD11O43934 449 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 FGF18O76093 207 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 ADRA1BP35368 520 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 GLUD2P49448 558 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 SEC24CP53992 1094 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 ARPP19P56211 112 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 GPR17Q13304 367 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 XRCC4Q13426 336 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 FAM72AQ5TYM5 149 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 SLC8B1Q6J4K2 584 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 FAM72DQ6L9T8 149 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 FAM72BQ86X60 149 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 CCDC110Q8TBZ0 833 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 OLFM3Q96PB7 478 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 PGLYRP2Q96PD5 576 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 PHACTR1Q9C0D0 580 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 CNOT10Q9H9A5 744 aaKnown RBP21.65■■□□□ 1.06
YBX3-202ENST00000279550 VPS37BQ9H9H4 285 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 PNPLA8Q9NP80 782 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 RAB6BQ9NRW1 208 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 PCDHB5Q9Y5E4 795 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 BACE2Q9Y5Z0 518 aa21.65■■□□□ 1.06
YBX3-202ENST00000279550 CREB1P16220 341 aa21.64■■□□□ 1.06
YBX3-202ENST00000279550 SMARCB1Q12824 385 aa21.64■■□□□ 1.06
YBX3-202ENST00000279550 BBS9Q3SYG4 887 aa21.64■■□□□ 1.06
YBX3-202ENST00000279550 EFHC2Q5JST6 749 aa21.64■■□□□ 1.06
YBX3-202ENST00000279550 VPS52Q8N1B4 723 aa21.64■■□□□ 1.06
YBX3-202ENST00000279550 SCAMP5Q8TAC9 235 aa21.64■■□□□ 1.06
YBX3-202ENST00000279550 IRGQQ8WZA9 623 aa21.64■■□□□ 1.06
YBX3-202ENST00000279550 EPN3Q9H201 632 aa21.64■■□□□ 1.06
YBX3-202ENST00000279550 DDIT4Q9NX09 232 aa21.64■■□□□ 1.06
YBX3-202ENST00000279550 STK39Q9UEW8 545 aa21.64■■□□□ 1.06
YBX3-202ENST00000279550 CREB3O43889 395 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 IVLP07476 585 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 VAV1P15498 845 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 CHN1P15882 459 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 GRIK1P39086 918 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 NR2C2P49116 596 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 DPYSQ14117 519 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 VSTM1Q6UX27 236 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 IGDCC3Q8IVU1 814 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 ATAD1Q8NBU5 361 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 BCAS4Q8TDM0 211 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 ARHGEF2Q92974 986 aaKnown RBP21.63■■□□□ 1.05
YBX3-202ENST00000279550 NTAN1Q96AB6 310 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 PGAP3Q96FM1 320 aaPredicted RBP21.63■■□□□ 1.05
YBX3-202ENST00000279550 CCDC77Q9BR77 488 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 FBXW11Q9UKB1 542 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 SNX10Q9Y5X0 201 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 MTMR11A4FU01 709 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 SMAPO00193 183 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 CHADO15335 359 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 ADAM12O43184 909 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms