RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 LGMNQ99538 433 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 TMEM216Q9P0N5 145 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 TXNDC9O14530 226 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 HCRTO43612 131 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 SPATA31D3P0C874 917 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 VAV1P15498 845 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 CUL3Q13618 768 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 BOLA3Q53S33 107 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 PACS1Q6VY07 963 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 SPATA31D4Q6ZUB0 917 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 CMC1Q7Z7K0 106 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 TTC30AQ86WT1 665 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 PYROXD2Q8N2H3 581 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 B4GALNT2Q8NHY0 566 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 FAM192AQ9GZU8 254 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 CXCL16Q9H2A7 254 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 ZNF638Q14966 1978 aaKnown RBP17.56■□□□□ 0.4
SPG7-201ENST00000268704 BPTFQ12830 3046 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 DCXO43602 365 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 RAG1P15918 1043 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 MGAT1P26572 445 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 ABCG1P45844 678 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 ITGA9Q13797 1035 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 TRIP10Q15642 601 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 TBC1D25Q3MII6 688 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 ACOT1Q86TX2 421 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 TFB1MQ8WVM0 346 aaKnown RBP17.56■□□□□ 0.4
SPG7-201ENST00000268704 COPS5Q92905 334 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 PGBD4Q96DM1 585 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 RNF19AQ9NV58 838 aa17.56■□□□□ 0.4
SPG7-201ENST00000268704 ITGAXP20702 1163 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 SERPINB9P50453 376 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 STILQ15468 1287 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 EFCAB12Q6NXP0 572 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 METTL7BQ6UX53 244 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 ACAD11Q709F0 780 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 CDKL3Q8IVW4 592 aaPredicted RBP17.55■□□□□ 0.4
SPG7-201ENST00000268704 PPP1R36Q96LQ0 422 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 OCEL1Q9H607 264 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 DNAJB4Q9UDY4 337 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 BARX2Q9UMQ3 279 aaPredicted RBP17.55■□□□□ 0.4
SPG7-201ENST00000268704 POMPQ9Y244 141 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 E9PBE3 544 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 PAPSS1O43252 624 aaPredicted RBP17.55■□□□□ 0.4
SPG7-201ENST00000268704 KLHL41O60662 606 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 ERVK-10P10266 1014 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 CDK18Q07002 472 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 FBXL19Q6PCT2 694 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 GORASP1Q9BQQ3 440 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 C2orf40Q9H1Z8 148 aa17.55■□□□□ 0.4
SPG7-201ENST00000268704 SCN1AP35498 2009 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 A6NJR5 290 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 NOP56O00567 594 aaKnown RBP17.54■□□□□ 0.4
SPG7-201ENST00000268704 CCNT2O60583 730 aaKnown RBP17.54■□□□□ 0.4
SPG7-201ENST00000268704 OR6B1O95007 311 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 IL18RAPO95256 599 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 SLC10A6Q3KNW5 377 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 TREML2Q5T2D2 321 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 HEATR6Q6AI08 1181 aaKnown RBP17.54■□□□□ 0.4
SPG7-201ENST00000268704 LCLAT1Q6UWP7 414 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 CCDC185Q8N715 623 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 C12orf42Q96LP6 360 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 GPR20Q99678 358 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 ZNF670Q9BS34 389 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 SF3B1O75533 1304 aaKnown RBP eCLIP17.54■□□□□ 0.42e-6■■■■■ 135.1
SPG7-201ENST00000268704 IGKV6-21A0A0C4DH24 114 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 ZNF195O14628 629 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 ZBTB14O43829 449 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 GCATO75600 419 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 ITGA2BP08514 1039 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 TPSB2P20231 275 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 NIPAL4Q0D2K0 466 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 MED21Q13503 144 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 TPSAB1Q15661 275 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 MARK2Q7KZI7 788 aaKnown RBP17.54■□□□□ 0.4
SPG7-201ENST00000268704 NCAPG2Q86XI2 1143 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 EZH1Q92800 747 aaPredicted RBP17.54■□□□□ 0.4
SPG7-201ENST00000268704 APBB2Q92870 758 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 DTLQ9NZJ0 730 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 HESX1Q9UBX0 185 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 NME7Q9Y5B8 376 aa17.54■□□□□ 0.4
SPG7-201ENST00000268704 GLRA3O75311 464 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 SERPINE1P05121 402 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 PGK2P07205 417 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 MLH1P40692 756 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 TBL3Q12788 808 aaKnown RBP17.53■□□□□ 0.4
SPG7-201ENST00000268704 HNRNPDQ14103 355 aaKnown RBP17.53■□□□□ 0.4
SPG7-201ENST00000268704 PGM2L1Q6PCE3 622 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 TIFABQ6ZNK6 161 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 SATL1Q86VE3 508 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 KLHL4Q9C0H6 718 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 IFT122Q9HBG6 1241 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 TMPRSS4Q9NRS4 437 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 HOXC10Q9NYD6 342 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 MAGED2Q9UNF1 606 aaPredicted RBP17.53■□□□□ 0.4
SPG7-201ENST00000268704 TNFSF13BQ9Y275 285 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 GJA3Q9Y6H8 435 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 PGM3O95394 542 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 GOT1P17174 413 aa17.53■□□□□ 0.4
SPG7-201ENST00000268704 CBLBQ13191 982 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms