RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PHF13Q86YI8 300 aaPredicted RBP11.84□□□□□ -0.51
VPS33A-201ENST00000267199 ALLCQ8N6M5 410 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 AFG1LQ8WV93 481 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 DAPK2Q9UIK4 370 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 TYW5A2RUC4 315 aaKnown RBP11.84□□□□□ -0.51
VPS33A-201ENST00000267199 E5RJQ4 531 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 LYPLA2O95372 231 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 HMOX2P30519 316 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 TRAF2Q12933 501 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 DMC1Q14565 340 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 CCDC103Q8IW40 242 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 MAB21L3Q8N8X9 362 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 RIN3Q8TB24 985 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 LENG9Q96B70 501 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 ACSS3Q9H6R3 686 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 RRN3Q9NYV6 651 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 ATXN10Q9UBB4 475 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 DRG1Q9Y295 367 aaKnown RBP11.84□□□□□ -0.51
VPS33A-201ENST00000267199 SCN11AQ9UI33 1791 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 A0A096LPK6 155 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 SMIM31A0A1B0GVY4 71 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 LACTBL1A8MY62 500 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 TRIM13O60858 407 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 UBA1P22314 1058 aaKnown RBP11.84□□□□□ -0.51
VPS33A-201ENST00000267199 S100A5P33763 92 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 KCNK10P57789 538 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 MGAT5Q09328 741 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 ZNF484Q5JVG2 852 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 LRRC38Q5VT99 294 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 VSTM1Q6UX27 236 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 DEFB132Q7Z7B7 95 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 GLMNQ92990 594 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 LENG1Q96BZ8 264 aaPredicted RBP11.84□□□□□ -0.51
VPS33A-201ENST00000267199 MBOAT7Q96N66 472 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 ASPSCR1Q9BZE9 553 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 EBF2Q9HAK2 575 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 OLA1Q9NTK5 396 aaKnown RBP11.84□□□□□ -0.51
VPS33A-201ENST00000267199 AK5Q9Y6K8 562 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 HEATR9A2RTY3 570 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 BCL10O95999 233 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 PTGIRP43119 386 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 ABCE1P61221 599 aaKnown RBP11.84□□□□□ -0.51
VPS33A-201ENST00000267199 CDC42EP1Q00587 391 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 ACSBG2Q5FVE4 666 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 SPDYAQ5MJ70 313 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
VPS33A-201ENST00000267199 ANKRD13AQ8IZ07 590 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 COLGALT1Q8NBJ5 622 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 ZC3H15Q8WU90 426 aaKnown RBP11.84□□□□□ -0.51
VPS33A-201ENST00000267199 BSNDQ8WZ55 320 aa11.84□□□□□ -0.51
VPS33A-201ENST00000267199 AFF4Q9UHB7 1163 aaKnown RBP11.84□□□□□ -0.51
VPS33A-201ENST00000267199 C15orf38-AP3S2A0A0A6YYH1 394 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 SIGLEC16A6NMB1 481 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 KCNK1O00180 336 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 PLK1P53350 603 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 OAZ1P54368 228 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 BCAT1P54687 386 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 SPIRE1Q08AE8 756 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 DMPKQ09013 629 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 GTF2H3Q13889 308 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 NAPEPLDQ6IQ20 393 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 RINLQ6ZS11 566 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 FAM43BQ6ZT52 329 aaPredicted RBP11.83□□□□□ -0.52
VPS33A-201ENST00000267199 BNIPLQ7Z465 357 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 ARPINQ7Z6K5 226 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 PHF21BQ96EK2 531 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 KDM4FA0A1W2PPD8 638 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 TCRBV9S1A1TA0A576 114 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 HMGCRP04035 888 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 AMPD1P23109 780 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 SLC26A2P50443 739 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 WDR4P57081 412 aaKnown RBP11.83□□□□□ -0.52
VPS33A-201ENST00000267199 CSHL1Q14406 222 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 SPRED3Q2MJR0 410 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 TSPAN14Q8NG11 270 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 RMDN1Q96DB5 314 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 LRRC40Q9H9A6 602 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 ZDHHC18Q9NUE0 388 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 COL20A1Q9P218 1284 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 LRFN2Q9ULH4 789 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 AP4B1Q9Y6B7 739 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 MYH6P13533 1939 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 hCG_1818297A0A087WSY0 165 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 AP3B1O00203 1094 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 ABLIM1O14639 778 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 ALOX15BO15296 676 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 INPP4BO15327 924 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 ARHGEF9O43307 516 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 CCNFP41002 786 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 ITGADQ13349 1161 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 CAPSQ13938 189 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 SHCBP1Q8NEM2 672 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 GPRC5AQ8NFJ5 357 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 RPL26L1Q9UNX3 145 aaKnown RBP11.83□□□□□ -0.52
VPS33A-201ENST00000267199 ACOT9Q9Y305 439 aa11.83□□□□□ -0.52
VPS33A-201ENST00000267199 SUPT3HB4E1H0 165 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 TPP1O14773 563 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 UBDO15205 165 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 ADCY6O43306 1168 aa11.82□□□□□ -0.52
VPS33A-201ENST00000267199 MTSS1O43312 755 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms