RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 LBHD1Q9BQE6 289 aaPredicted RBP13.06□□□□□ -0.32
PRPF6-201ENST00000266079 HTATIP2Q9BUP3 242 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 RHOBTB2Q9BYZ6 727 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 NPHS2Q9NP85 383 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 GDAP2Q9NXN4 497 aa13.06□□□□□ -0.32
PRPF6-201ENST00000266079 EXOC1LA0A1B0GW35 172 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 GYG2O15488 501 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 HAUS5O94927 633 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 IMPDH2P12268 514 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 GCAP28676 217 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 ALDH7A1P49419 539 aaKnown RBP13.05□□□□□ -0.32
PRPF6-201ENST00000266079 PPIGQ13427 754 aaKnown RBP eCLIP13.05□□□□□ -0.321e-9■■□□□ 12
PRPF6-201ENST00000266079 DAB2IPQ5VWQ8 1189 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 DCLRE1AQ6PJP8 1040 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 MCUR1Q96AQ8 359 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 DDX27Q96GQ7 796 aaKnown RBP13.05□□□□□ -0.32
PRPF6-201ENST00000266079 NSL1Q96IY1 281 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 SMC6Q96SB8 1091 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 DDX50Q9BQ39 737 aaKnown RBP13.05□□□□□ -0.32
PRPF6-201ENST00000266079 NUP85Q9BW27 656 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 TSPAN16Q9UKR8 245 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 G3BP2Q9UN86 482 aaKnown RBP13.05□□□□□ -0.32
PRPF6-201ENST00000266079 C5orf42Q9H799 3197 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 PDCD11Q14690 1871 aaKnown RBP13.05□□□□□ -0.32
PRPF6-201ENST00000266079 GRXCR1A8MXD5 290 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 STAU1O95793 577 aaKnown RBP13.05□□□□□ -0.32
PRPF6-201ENST00000266079 GALTP07902 379 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 CA4P22748 312 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 VPS41P49754 854 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 MDH1BQ5I0G3 518 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 TMEM240Q5SV17 173 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 CYP4A22Q5TCH4 519 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 TAS1R1Q7RTX1 841 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 TDRPQ86YL5 185 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 RBM12BQ8IXT5 1001 aaKnown RBP13.05□□□□□ -0.32
PRPF6-201ENST00000266079 TNS4Q8IZW8 715 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 VPS52Q8N1B4 723 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 LRRC43Q8N309 656 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 BBOF1Q8ND07 529 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 SLC2A14Q8TDB8 520 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 WDR60Q8WVS4 1066 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 HAPLN3Q96S86 360 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 MMADHCQ9H3L0 296 aaPredicted RBP13.05□□□□□ -0.32
PRPF6-201ENST00000266079 SENP1Q9P0U3 644 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 CNTN6Q9UQ52 1028 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 MYBPHLA2RUH7 354 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 ZCCHC18P0CG32 403 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 TROVE2P10155 538 aaKnown RBP eCLIP13.05□□□□□ -0.327e-6■□□□□ 11.1
PRPF6-201ENST00000266079 RRM1P23921 792 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 CA8P35219 290 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 MAGEA4P43358 317 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 INCA1Q0VD86 236 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 LSAMPQ13449 338 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 GOLGA7BQ2TAP0 167 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 LIN52Q52LA3 116 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 SPRED2Q7Z698 418 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 C4orf33Q8N1A6 199 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 DCLK3Q9C098 648 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 ADAM28Q9UKQ2 775 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 TMCO1Q9UM00 188 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 COMMD3-BMI1R4GMX3 469 aa13.05□□□□□ -0.32
PRPF6-201ENST00000266079 PRUNE2Q8WUY3 3088 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 CFAP69A5D8W1 941 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 HOXA2O43364 376 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 MICAL2O94851 1124 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 ODC1P11926 461 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 GZMAP12544 262 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 KRT15P19012 456 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 DNAJB2P25686 324 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 NSFP46459 744 aaKnown RBP13.04□□□□□ -0.32
PRPF6-201ENST00000266079 C9orf50Q5SZB4 431 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 OVOS1Q6IE37 1185 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 LCA5Q86VQ0 697 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 CFAP57Q96MR6 1250 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 MED10Q9BTT4 135 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 MARCH5Q9NX47 278 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 CYTH4Q9UIA0 394 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 TTC36A6NLP5 189 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 CYP1A2P05177 515 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 NEK3P51956 506 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 IZUMO3Q5VZ72 239 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 FAM109BQ6ICB4 259 aaPredicted RBP13.04□□□□□ -0.32
PRPF6-201ENST00000266079 B3GALNT2Q8NCR0 500 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 ZNF653Q96CK0 615 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 PGLYRP2Q96PD5 576 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 TUBGCP5Q96RT8 1024 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 TSPAN18Q96SJ8 248 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 CENPKQ9BS16 269 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 ANGPTL2Q9UKU9 493 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 MRPL42Q9Y6G3 142 aaKnown RBP13.04□□□□□ -0.32
PRPF6-201ENST00000266079 WASF2Q9Y6W5 498 aa13.04□□□□□ -0.32
PRPF6-201ENST00000266079 LCHNA4D1U4 455 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 MYOGP15173 224 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 RPL17P18621 184 aaKnown RBP13.03□□□□□ -0.32
PRPF6-201ENST00000266079 THOC5Q13769 683 aaKnown RBP13.03□□□□□ -0.32
PRPF6-201ENST00000266079 MYBPC3Q14896 1274 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 CLEC16AQ2KHT3 1053 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 LVRNQ6Q4G3 990 aa13.03□□□□□ -0.32
PRPF6-201ENST00000266079 WDTC1Q8N5D0 677 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms