RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 WASHC5Q12768 1159 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 LAMB3Q13751 1172 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 DLG2Q15700 870 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 TREML2Q5T2D2 321 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 PACS1Q6VY07 963 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 CATSPERGQ6ZRH7 1159 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 DNAAF3Q8N9W5 541 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 HOXC10Q9NYD6 342 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 CDH22Q9UJ99 828 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 ZNF180Q9UJW8 692 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 RPS6KL1Q9Y6S9 549 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 KCNK1O00180 336 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 B4GALT4O60513 344 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 FGF3P11487 239 aaPredicted RBP12.75□□□□□ -0.37
CHMP3-201ENST00000263856 CD1EP15812 388 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 TGM2P21980 687 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 ZNF534Q76KX8 674 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 GALNT4Q8N4A0 578 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 CCDC185Q8N715 623 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 RNF217Q8TC41 542 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 KLHL4Q9C0H6 718 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 C2orf40Q9H1Z8 148 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 SYBUQ9NX95 663 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 MGAMO43451 1857 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 PLSCR1O15162 318 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 ADCY6O43306 1168 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 GLRA3O75311 464 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 FKBP6O75344 327 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 PSMB4P28070 264 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 RANBP1P43487 201 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 GLRBP48167 497 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 IDH3AP50213 366 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 SERPINB9P50453 376 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 PKNOX1P55347 436 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 HDAC4P56524 1084 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 PDK2Q15119 407 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 C11orf91Q3C1V1 193 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 LIN52Q52LA3 116 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 MBLAC2Q68D91 279 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 ATG14Q6ZNE5 492 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 NLRP7Q8WX94 980 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 MRPL45Q9BRJ2 306 aaKnown RBP12.75□□□□□ -0.37
CHMP3-201ENST00000263856 BCO2Q9BYV7 579 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 WDR55Q9H6Y2 383 aaPredicted RBP12.75□□□□□ -0.37
CHMP3-201ENST00000263856 APPL1Q9UKG1 709 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 EMCNQ9ULC0 261 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 CENPFP49454 3210 aa12.75□□□□□ -0.37
CHMP3-201ENST00000263856 SOWAHBA6NEL2 793 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 FAM159BA6NKW6 160 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 PPEF2O14830 753 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 SNNO75324 88 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-201ENST00000263856 ITGA2BP08514 1039 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 ENO3P13929 434 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-201ENST00000263856 CCNFP41002 786 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 CCR10P46092 362 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 MAP3K10Q02779 954 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 CCNIQ14094 377 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 PCLAFQ15004 111 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 STILQ15468 1287 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 RNF111Q6ZNA4 994 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 MAVSQ7Z434 540 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 TTC30AQ86WT1 665 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 ZNF781Q8N8C0 355 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 ICA1LQ8NDH6 482 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 ZNF669Q96BR6 464 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-201ENST00000263856 CNBD2Q96M20 576 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 CXCL16Q9H2A7 254 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 PNPLA8Q9NP80 782 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 BARX2Q9UMQ3 279 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-201ENST00000263856 POMPQ9Y244 141 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 PPME1Q9Y570 386 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 ZNF646O15015 1829 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-201ENST00000263856 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-201ENST00000263856 PLIN3O60664 434 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 KLHL2O95198 593 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 CCDC130P13994 396 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 CPOXP36551 454 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 MRPS22P82650 360 aaKnown RBP12.74□□□□□ -0.37
CHMP3-201ENST00000263856 NME3Q13232 169 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 GSTA3Q16772 222 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 PPM1LQ5SGD2 360 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 TSHZ1Q6ZSZ6 1077 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 MARK2Q7KZI7 788 aaKnown RBP12.74□□□□□ -0.37
CHMP3-201ENST00000263856 PID1Q7Z2X4 250 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 TP53INP2Q8IXH6 220 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 DNAJC1Q96KC8 554 aaKnown RBP12.74□□□□□ -0.37
CHMP3-201ENST00000263856 NR1H4Q96RI1 486 aaPredicted RBP12.74□□□□□ -0.37
CHMP3-201ENST00000263856 GORASP1Q9BQQ3 440 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 DPP3Q9NY33 737 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 INPP5FQ9Y2H2 1132 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 HES2Q9Y543 173 aa12.74□□□□□ -0.37
CHMP3-201ENST00000263856 PAPSS1O43252 624 aaPredicted RBP12.73□□□□□ -0.37
CHMP3-201ENST00000263856 AMHP03971 560 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 SERPINE1P05121 402 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 VAV1P15498 845 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 CRABP2P29373 138 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 ARRB2P32121 409 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 AVPR1AP37288 418 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 ARL4AP40617 200 aa12.73□□□□□ -0.37
CHMP3-201ENST00000263856 GABRB2P47870 512 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms