RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 ARMCX1Q9P291 453 aa8.52□□□□□ -1.04
SNCAIP-201ENST00000261367 REXO2Q9Y3B8 237 aaKnown RBP8.52□□□□□ -1.04
SNCAIP-201ENST00000261367 GPR75-ASB3A0A0A6YYF3 556 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 MEI4A8MW99 385 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 IFNA14P01570 189 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 TIE1P35590 1138 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 TOB1P50616 345 aaPredicted RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 AKR1D1P51857 326 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 MGAT5Q09328 741 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 ADGRE1Q14246 886 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 RBBP7Q16576 425 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 TTC7BQ86TV6 843 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 SPATA18Q8TC71 538 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 SNX19Q92543 992 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 MRPL48Q96GC5 212 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 CPNE1Q99829 537 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 SERHL2Q9H4I8 314 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 KANSL2Q9H9L4 492 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 SERHLQ9NQF3 203 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 LMCD1Q9NZU5 365 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 CDH22Q9UJ99 828 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 MTF2Q9Y483 593 aaPredicted RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 ASB3Q9Y575 518 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 E9PBE3 544 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 ZBTB39O15060 712 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 PDPK1O15530 556 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 TGM2P21980 687 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 F8A1P23610 371 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 MAPK1P28482 360 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 ERP29P30040 261 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 PUDPQ08623 228 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 EPHA7Q15375 998 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 LRRC38Q5VT99 294 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 TWF2Q6IBS0 349 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 PADI6Q6TGC4 694 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 CRTC3Q6UUV7 619 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 ILDR1Q86SU0 546 aaPredicted RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 PDSS2Q86YH6 399 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 ARMC8Q8IUR7 673 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 TTC16Q8NEE8 873 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 RNASE11Q8TAA1 199 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 CABLES1Q8TDN4 633 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 MED10Q9BTT4 135 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 EMILIN2Q9BXX0 1053 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 EBF3Q9H4W6 596 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 ACSS3Q9H6R3 686 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 ENTPD7Q9NQZ7 604 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 VPS9D1Q9Y2B5 631 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 SF3B1O75533 1304 aaKnown RBP eCLIP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 DDX60Q8IY21 1712 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 PP2D1A8MPX8 630 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 GSG1L2A8MUP6 293 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 HUS1O60921 280 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 HOXB8P17481 243 aaPredicted RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 TGFBR2P37173 567 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 RPL14P50914 215 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 FASTKQ14296 549 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 ATP13A5Q4VNC0 1218 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 NAPEPLDQ6IQ20 393 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 SPOCD1Q6ZMY3 1216 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 FOXP4Q8IVH2 680 aaPredicted RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 C12orf50Q8NA57 414 aaPredicted RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 MSTO1Q9BUK6 570 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 ZC3H12CQ9C0D7 883 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 LRRC40Q9H9A6 602 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 NGRNQ9NPE2 291 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 MRPL39Q9NYK5 338 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 PCDHGB4Q9UN71 923 aa8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 EIF3LQ9Y262 564 aaKnown RBP8.52□□□□□ -1.05
SNCAIP-201ENST00000261367 C3orf70A6NLC5 250 aaPredicted RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 IFNA7P01567 189 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 MYCLP12524 364 aaPredicted RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 HALP42357 657 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 GABRB2P47870 512 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 MAD2L1Q13257 205 aaPredicted RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 NADK2Q4G0N4 442 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 SBK1Q52WX2 424 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 EFHC2Q5JST6 749 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 TTC23LQ6PF05 361 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 DPP8Q6V1X1 898 aaPredicted RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 NOP9Q86U38 636 aaKnown RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 LARGE2Q8N3Y3 721 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 PUS3Q9BZE2 481 aaKnown RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 GSTK1Q9Y2Q3 226 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 GIT1Q9Y2X7 761 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CNTNAP5Q8WYK1 1306 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CST8O60676 142 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 DNAJA2O60884 412 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 APOL3O95236 402 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 FKBP9O95302 570 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 GDF11O95390 407 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 S100A6P06703 90 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 BCAMP50895 628 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 PSME3P61289 254 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 ACAP1Q15027 740 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 ZC3H12AQ5D1E8 599 aaKnown RBP8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 PGAM4Q8N0Y7 254 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CENPSQ8N2Z9 138 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 CNTD1Q8N815 330 aa8.51□□□□□ -1.05
SNCAIP-201ENST00000261367 TRUB1Q8WWH5 349 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms