RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ARPINQ7Z6K5 226 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 AMIGO2Q86SJ2 522 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 LNX1Q8TBB1 728 aaPredicted RBP9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 LPAR1Q92633 364 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 GINS4Q9BRT9 223 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 COMMD8Q9NX08 183 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 C2orf71A6NGG8 1288 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 TIMM44O43615 452 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 FDX1P10109 184 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 NCAM1P13591 858 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 TRIM71Q2Q1W2 868 aaKnown RBP9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 ACOT1Q86TX2 421 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 BPIFB6Q8NFQ5 453 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 SCFD2Q8WU76 684 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 PPP1R10Q96QC0 940 aaKnown RBP9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 FANCEQ9HB96 536 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 PCDH12Q9NPG4 1184 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 NCKIPSDQ9NZQ3 722 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 EIF3LQ9Y262 564 aaKnown RBP9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 NWD1Q149M9 1564 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 IL18RAPO95256 599 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 MSX2P35548 267 aaPredicted RBP9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 LDLRAP1Q5SW96 308 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 ABRAQ8N0Z2 381 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 NAT14Q8WUY8 206 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 OSCP1Q8WVF1 389 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 CLPTM1LQ96KA5 538 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 OSBPL7Q9BZF2 842 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 UBP1Q9NZI7 540 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 SNX8Q9Y5X2 465 aa9.98□□□□□ -0.81
CTDSPL2-201ENST00000260327 NPTXRO95502 500 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 HK2P52789 917 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 FBXW4P57775 412 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 NCF4Q15080 339 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 DDI2Q5TDH0 399 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM45BPQ6NSW5 357 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 C11orf88Q6PI97 169 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 TMCO1Q9UM00 188 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 SHOC2Q9UQ13 582 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLCO1B7G3V0H7 640 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 M0QYT0 321 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZBTB11O95625 1053 aaPredicted RBP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 CPSF4O95639 269 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 PRIM2P49643 509 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 CCDC153Q494R4 210 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 LIN52Q52LA3 116 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZRANB3Q5FWF4 1079 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 IRF2BP1Q8IU81 584 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 SVOPQ8N4V2 548 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 HTRA1Q92743 480 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 MTMR9Q96QG7 549 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 MAN1C1Q9NR34 630 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 TUBA8Q9NY65 449 aaPredicted RBP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 DSEQ9UL01 958 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 FOXO6A8MYZ6 492 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 BTN3A3O00478 584 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 WFS1O76024 890 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 MYCP01106 439 aaPredicted RBP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 UQCRBP14927 111 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 C4BPBP20851 252 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 GRIA3P42263 894 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 PTRHD1Q6GMV3 140 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 C4orf22Q6V702 233 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 GANQ9H2C0 597 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 EPB41L1Q9H4G0 881 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 LIMD1Q9UGP4 676 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 SOAT2O75908 522 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 GUCA1CO95843 209 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 MPP3Q13368 585 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 DDX39BQ13838 428 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 SPDYCQ5MJ68 293 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 TRPC4APQ8TEL6 797 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 RXFP2Q8WXD0 754 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 DNAJC1Q96KC8 554 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 LYNP07948 512 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 DBTP11182 482 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 CCNA2P20248 432 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 CNTFP26441 200 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 ATP12AP54707 1039 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 SRP54P61011 504 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 KYAT1Q16773 422 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 EFL1Q7Z2Z2 1120 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 IQCKQ8N0W5 287 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 EID3Q8N140 333 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 PRELID2Q8N945 189 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 ETNPPLQ8TBG4 499 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 MAGEC3Q8TD91 643 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZNF606Q8WXB4 792 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 C17orf75Q9HAS0 396 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 DUSP12Q9UNI6 340 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 ACOT9Q9Y305 439 aa9.97□□□□□ -0.81
CTDSPL2-201ENST00000260327 DDTLA6NHG4 134 aaPredicted RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 VWA5AO00534 786 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 CACHD1Q5VU97 1274 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 ZNF662Q6ZS27 426 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 ARMC7Q9H6L4 198 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 LRRC40Q9H9A6 602 aa9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 RPRD1BQ9NQG5 326 aaKnown RBP9.96□□□□□ -0.81
CTDSPL2-201ENST00000260327 ARHGEF3Q9NR81 526 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms