RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TPI1P60174 286 aa19.52■□□□□ 0.72
TRIM47-201ENST00000254816 GAD2Q05329 585 aa19.52■□□□□ 0.72
TRIM47-201ENST00000254816 IFFO1Q0D2I5 559 aa19.52■□□□□ 0.72
TRIM47-201ENST00000254816 SMARCB1Q12824 385 aa19.52■□□□□ 0.72
TRIM47-201ENST00000254816 RASIP1Q5U651 963 aa19.52■□□□□ 0.72
TRIM47-201ENST00000254816 OXCT2Q9BYC2 517 aaPredicted RBP19.52■□□□□ 0.72
TRIM47-201ENST00000254816 MCOLN1Q9GZU1 580 aa19.52■□□□□ 0.72
TRIM47-201ENST00000254816 SIK2Q9H0K1 926 aa19.52■□□□□ 0.72
TRIM47-201ENST00000254816 PABPC3Q9H361 631 aaKnown RBP19.52■□□□□ 0.72
TRIM47-201ENST00000254816 CDC42EP4Q9H3Q1 356 aaKnown RBP19.52■□□□□ 0.72
TRIM47-201ENST00000254816 NOVA2Q9UNW9 492 aaKnown RBP19.52■□□□□ 0.72
TRIM47-201ENST00000254816 BACE2Q9Y5Z0 518 aa19.52■□□□□ 0.72
TRIM47-201ENST00000254816 GOLGA8MH3BSY2 632 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 TBX18O95935 607 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 RARGP13631 454 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 ERCC2P18074 760 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 DNAJB2P25686 324 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 STIP1P31948 543 aaKnown RBP19.51■□□□□ 0.71
TRIM47-201ENST00000254816 MDH1P40925 334 aaKnown RBP19.51■□□□□ 0.71
TRIM47-201ENST00000254816 NR2C2P49116 596 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 SLMAPQ14BN4 828 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 SYCP2LQ5T4T6 812 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 EMC10Q5UCC4 262 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 ANKRD22Q5VYY1 191 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 C2orf15Q8WU43 125 aaKnown RBP19.51■□□□□ 0.71
TRIM47-201ENST00000254816 TCRBV7S3A2A0A539 114 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 BCLAF3A2AJT9 711 aaKnown RBP19.51■□□□□ 0.71
TRIM47-201ENST00000254816 NDUFAB1O14561 156 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 DCLK1O15075 740 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 BAIAP3O94812 1187 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 SEC24AO95486 1093 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 LAG3P18627 525 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 GLUD2P49448 558 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 SLC29A2Q14542 456 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 CPT1BQ92523 772 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 SPATA17Q96L03 361 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 ARHGEF38Q9NXL2 777 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 SPG21Q9NZD8 308 aa19.51■□□□□ 0.71
TRIM47-201ENST00000254816 XPO7Q9UIA9 1087 aaKnown RBP19.51■□□□□ 0.71
TRIM47-201ENST00000254816 MYO18AQ92614 2054 aaKnown RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 FAM92AA1XBS5 289 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 SLC38A8A6NNN8 435 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 RTN3O95197 1032 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 MOCS2O96007 188 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 SEC24CP53992 1094 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 BASP1P80723 227 aaKnown RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 DSG1Q02413 1049 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 UBE2Q1Q7Z7E8 422 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 PRCCQ92733 491 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 LGMNQ99538 433 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 FARP1Q9Y4F1 1045 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 PLXNA4Q9HCM2 1894 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 RIPK2O43353 540 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 LRIG2O94898 1065 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 SRGAP2BP0DMP2 458 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 RPL10AP62906 217 aaKnown RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 EFEMP1Q12805 493 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 SLC45A4Q5BKX6 768 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 HP1BP3Q5SSJ5 553 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 CDKL3Q8IVW4 592 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 ZCCHC9Q8N567 271 aaKnown RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 CCDC110Q8TBZ0 833 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 OLFM3Q96PB7 478 aa19.5■□□□□ 0.71
TRIM47-201ENST00000254816 CXXC1Q9P0U4 656 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-201ENST00000254816 PAGE1O75459 146 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 FGBP02675 491 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 VAV1P15498 845 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 CCR1P32246 355 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 MAGOHP61326 146 aaKnown RBP19.49■□□□□ 0.71
TRIM47-201ENST00000254816 XRCC4Q13426 336 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 MORF4L2Q15014 288 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 FAXCQ5TGI0 409 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 DENND2CQ68D51 928 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 VPS52Q8N1B4 723 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 ARHGAP18Q8N392 663 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 QKIQ96PU8 341 aaKnown RBP eCLIP19.49■□□□□ 0.71
TRIM47-201ENST00000254816 HERC2P3Q9BVR0 1158 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 EPN3Q9H201 632 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 PRKAG2Q9UGJ0 569 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 A6NNZ2 444 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 EBAG9O00559 213 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 ACSL3O95573 720 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 EPHB2P29323 1055 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 MTM1Q13496 603 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 PAFAH1B3Q15102 231 aaKnown RBP19.49■□□□□ 0.71
TRIM47-201ENST00000254816 TUBB8Q3ZCM7 444 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 SPDYCQ5MJ68 293 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 AGBL2Q5U5Z8 902 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 SERPINB11Q96P15 392 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 RBM15Q96T37 977 aaKnown RBP eCLIP19.49■□□□□ 0.714e-7■■□□□ 14.5
TRIM47-201ENST00000254816 EPAS1Q99814 870 aa19.49■□□□□ 0.71
TRIM47-201ENST00000254816 TLR8Q9NR97 1041 aaKnown RBP19.49■□□□□ 0.71
TRIM47-201ENST00000254816 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.49■□□□□ 0.71
TRIM47-201ENST00000254816 SMIM23A6NLE4 172 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 BANF1O75531 89 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 KYNUQ16719 465 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 BRMS1LQ5PSV4 323 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 PPIL6Q8IXY8 311 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 NPWQ8N729 165 aa19.48■□□□□ 0.71
TRIM47-201ENST00000254816 NAT8LQ8N9F0 302 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms