RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 OR52K1Q8NGK4 314 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 PHF21BQ96EK2 531 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 SERAC1Q96JX3 654 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF395Q9H8N7 513 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 LRRC40Q9H9A6 602 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 CYLDQ9NQC7 956 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 CEP290O15078 2479 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF541Q9H0D2 1346 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ERBB2P04626 1255 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 CCDC130P13994 396 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 LAMC2Q13753 1193 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF484Q5JVG2 852 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 RNF220Q5VTB9 566 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 NKD2Q969F2 451 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ACO2Q99798 780 aaKnown RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 TMEM79Q9BSE2 394 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 MAGEB5Q9BZ81 275 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 SLC17A6Q9P2U8 582 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 SNCAIPQ9Y6H5 919 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 CETPP11597 493 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 TAF6P49848 677 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 MRPS22P82650 360 aaKnown RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 GPR162Q16538 588 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 SPATA6LQ8N4H0 392 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 FAM192AQ9GZU8 254 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 LZTS1Q9Y250 596 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 SEC16AO15027 2179 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ARHGEF37A1IGU5 675 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 SPTLC1O15269 473 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 PAPSS1O43252 624 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 TBCCQ15814 346 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ARHGAP22Q7Z5H3 698 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 SETD3Q86TU7 594 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 STKLD1Q8NE28 680 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 STX18Q9P2W9 335 aaKnown RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 HBS1LQ9Y450 684 aaKnown RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 F8W8V4 182 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 WNT10BO00744 389 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 TRDMT1O14717 391 aaKnown RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 PRPF4O43172 522 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 BPGMP07738 259 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ACO1P21399 889 aaKnown RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 MAP3K7CLP57077 242 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 STX5Q13190 355 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 CHADLQ6NUI6 762 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 OR6Y1Q8NGX8 325 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.73□□□□□ -1.654e-6■■■■■ 41.2
VPS13C-201ENST00000249837 RCN3Q96D15 328 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 TSPAN17Q96FV3 270 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 WNK4Q96J92 1243 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF570Q96NI8 536 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 APBA2Q99767 749 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 CDT1Q9H211 546 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ADNPQ9H2P0 1102 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 MRPL40Q9NQ50 206 aaKnown RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 IL1RAPL1Q9NZN1 696 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 RABGEF1Q9UJ41 708 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 SNX10Q9Y5X0 201 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 DOT1LQ8TEK3 1739 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 MTSS1O43312 755 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 VAPBO95292 243 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 GOT1P17174 413 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 PSMC3P17980 439 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 NFKBIAP25963 317 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ECHS1P30084 290 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 TAS2R42Q7RTR8 314 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 BLOC1S5Q8TDH9 187 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 VPS50Q96JG6 964 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 PTPRHQ9HD43 1115 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ATICP31939 592 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 KRT72Q14CN4 511 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 METTL7BQ6UX53 244 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ZDHHC14Q8IZN3 488 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 PCYOX1LQ8NBM8 494 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 BORCS6Q96GS4 357 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 TRPC7Q9HCX4 862 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 TBC1D23Q9NUY8 699 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ACOT9Q9Y305 439 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 CXorf49A8MYA2 514 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 VNN1O95497 513 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 SP100P23497 879 aaPredicted RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 CSE1LP55060 971 aaKnown RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 CAPSQ13938 189 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 RNASEH2BQ5TBB1 312 aaKnown RBP4.73□□□□□ -1.65
VPS13C-201ENST00000249837 UNC5AQ6ZN44 842 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 KIAA0319LQ8IZA0 1049 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 PLD5Q8N7P1 536 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 AZIN2Q96A70 460 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 ARHGEF3Q9NR81 526 aa4.73□□□□□ -1.65
VPS13C-201ENST00000249837 RRN3P2A6NIE6 340 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 B4GALT5O43286 388 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 NDUFS3O75489 264 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 DDHD2O94830 711 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 MMP14P50281 582 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 GSCP56915 257 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 RTP1P59025 263 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 LAMB3Q13751 1172 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PRDM12Q9H4Q4 367 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CHST12Q9NRB3 414 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SPDYE5A6NIY4 337 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms