RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 OTOAQ7RTW8 1153 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 MRPL10Q7Z7H8 261 aaKnown RBP22.35■■□□□ 1.17
CLN6-201ENST00000249806 CNGB3Q9NQW8 809 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 SEPT4O43236 478 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 ADAMTS4O75173 837 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 CSH1P0DML2 217 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 CSH2P0DML3 217 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 RPL9P32969 192 aaKnown RBP22.35■■□□□ 1.17
CLN6-201ENST00000249806 CACNB2Q08289 660 aaPredicted RBP22.35■■□□□ 1.17
CLN6-201ENST00000249806 BNIP1Q12981 228 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 KCNA10Q16322 511 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 PTPRN2Q92932 1015 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 FAM111AQ96PZ2 611 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 ECT2Q9H8V3 914 aa22.35■■□□□ 1.17
CLN6-201ENST00000249806 NUP205Q92621 2012 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 NEK3P51956 506 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 FCGRTP55899 365 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 CYB5D1Q6P9G0 228 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 CDHR3Q6ZTQ4 885 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 UNC5BQ8IZJ1 945 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 GSDMBQ8TAX9 411 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 APOPT1Q96IL0 206 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 XAB2Q9HCS7 855 aaKnown RBP22.34■■□□□ 1.17
CLN6-201ENST00000249806 XPNPEP3Q9NQH7 507 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 DDIT4Q9NX09 232 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 DCLK1O15075 740 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 CA12O43570 354 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 LTFP02788 710 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 ETV4P43268 484 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 GLUD2P49448 558 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 NCALDP61601 193 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 WASHC5Q12768 1159 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 BMPR2Q13873 1038 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 PAFAH1B3Q15102 231 aaKnown RBP22.34■■□□□ 1.17
CLN6-201ENST00000249806 PDK1Q15118 436 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 BHLHA9Q7RTU4 235 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 TBC1D1Q86TI0 1168 aaPredicted RBP22.34■■□□□ 1.17
CLN6-201ENST00000249806 MYLPFQ96A32 169 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 SMARCD1Q96GM5 515 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 VPS11Q9H270 941 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 INPP5FQ9Y2H2 1132 aa22.34■■□□□ 1.17
CLN6-201ENST00000249806 WDR27A2RRH5 827 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 KCNK1O00180 336 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 SNRPAP09012 282 aaKnown RBP22.33■■□□□ 1.17
CLN6-201ENST00000249806 ERCC2P18074 760 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 BDNFP23560 247 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 CCND3P30281 292 aaPredicted RBP22.33■■□□□ 1.17
CLN6-201ENST00000249806 FDFT1P37268 417 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 CAP1Q01518 475 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 PRKCZQ05513 592 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 ZNF567Q8N184 647 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 GBP7Q8N8V2 638 aaPredicted RBP22.33■■□□□ 1.17
CLN6-201ENST00000249806 SLC9A7Q96T83 725 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 MANSC1Q9H8J5 431 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 ZNF180Q9UJW8 692 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 FBXW11Q9UKB1 542 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 PCDHA11Q9Y5I1 949 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 PTCH2Q9Y6C5 1203 aa22.33■■□□□ 1.17
CLN6-201ENST00000249806 KRT37O76014 449 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 PSMB4P28070 264 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 PCSK1P29120 753 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 SREBF2Q12772 1141 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 BSPRYQ5W0U4 402 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 CASC4Q6P4E1 433 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 RPAINQ86UA6 219 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 OXNAD1Q96HP4 312 aaPredicted RBP22.33■■□□□ 1.16
CLN6-201ENST00000249806 ADAM2Q99965 735 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 TMLHEQ9NVH6 421 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 TMEM51Q9NW97 253 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 SNX10Q9Y5X0 201 aa22.33■■□□□ 1.16
CLN6-201ENST00000249806 C9IYK1 514 aa22.32■■□□□ 1.16
CLN6-201ENST00000249806 ZNF623O75123 536 aa22.32■■□□□ 1.16
CLN6-201ENST00000249806 DHRS4L1P0CG22 281 aa22.32■■□□□ 1.16
CLN6-201ENST00000249806 SESN2P58004 480 aaPredicted RBP22.32■■□□□ 1.16
CLN6-201ENST00000249806 SARNPP82979 210 aaKnown RBP22.32■■□□□ 1.16
CLN6-201ENST00000249806 OVGP1Q12889 678 aa22.32■■□□□ 1.16
CLN6-201ENST00000249806 CD300LGQ6UXG3 332 aa22.32■■□□□ 1.16
CLN6-201ENST00000249806 TTC17Q96AE7 1141 aa22.32■■□□□ 1.16
CLN6-201ENST00000249806 TMEM209Q96SK2 561 aa22.32■■□□□ 1.16
CLN6-201ENST00000249806 COLEC11Q9BWP8 271 aa22.32■■□□□ 1.16
CLN6-201ENST00000249806 PRDM16Q9HAZ2 1276 aa22.32■■□□□ 1.16
CLN6-201ENST00000249806 A0A0U1RQF3 1178 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 FAM159BA6NKW6 160 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 F8W810 466 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 OPHN1O60890 802 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 GSTA2P09210 222 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 ODC1P11926 461 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 SEMA3BQ13214 749 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 LPIN1Q14693 890 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 NTAN1Q96AB6 310 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 STAMBPL1Q96FJ0 436 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 SRPK1Q96SB4 655 aaKnown RBP22.31■■□□□ 1.16
CLN6-201ENST00000249806 CHKBQ9Y259 395 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 TDRD15B5MCY1 1934 aaKnown RBP22.31■■□□□ 1.16
CLN6-201ENST00000249806 SF3B1O75533 1304 aaKnown RBP eCLIP22.31■■□□□ 1.166e-9■■■■■ 118.2
CLN6-201ENST00000249806 HMX2A2RU54 273 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 PPP1R12AO14974 1030 aaPredicted RBP22.31■■□□□ 1.16
CLN6-201ENST00000249806 RFPL1O75677 317 aa22.31■■□□□ 1.16
CLN6-201ENST00000249806 STK10O94804 968 aaKnown RBP22.31■■□□□ 1.16
CLN6-201ENST00000249806 ITGB1P05556 798 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms