RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 CCL15-CCL14A0A0B4J2E2 113 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 TRDMT1O14717 391 aaKnown RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 CCL15Q16663 113 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 CDRT15Q96T59 188 aa20.32■□□□□ 0.84
SOX4-201ENST00000244745 COPS7BQ9H9Q2 264 aaPredicted RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 PRG3Q9Y2Y8 225 aaPredicted RBP20.32■□□□□ 0.84
SOX4-201ENST00000244745 RGS5O15539 181 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 GLP2RO95838 553 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 NR2C2P49116 596 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 LRRC8DQ7L1W4 858 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 PRRG1O14668 218 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 LIN7AO14910 233 aaPredicted RBP20.31■□□□□ 0.84
SOX4-201ENST00000244745 TRAPPC12Q8WVT3 735 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 EIF4BP23588 611 aaKnown RBP20.31■□□□□ 0.84
SOX4-201ENST00000244745 PIDD1Q9HB75 910 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 CDV3Q9UKY7 258 aaKnown RBP20.31■□□□□ 0.84
SOX4-201ENST00000244745 E5RJQ4 531 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 MAPK10P53779 464 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 KCNT2Q6UVM3 1135 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 FAM81AQ8TBF8 368 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 ZNF483Q8TF39 744 aaPredicted RBP20.31■□□□□ 0.84
SOX4-201ENST00000244745 TBCBQ99426 244 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 SEPHS2Q99611 448 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 APBA2Q99767 749 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 PTPRHQ9HD43 1115 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 PDGFCQ9NRA1 345 aa20.31■□□□□ 0.84
SOX4-201ENST00000244745 F5H5T6 163 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 CD151P48509 253 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 FBXO47Q5MNV8 452 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 POMKQ9H5K3 350 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 CROTQ9UKG9 612 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 ERI2A8K979 691 aaKnown RBP20.3■□□□□ 0.84
SOX4-201ENST00000244745 PAEPP09466 180 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 NCALDP61601 193 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 NBPF12Q5TAG4 269 aaPredicted RBP20.3■□□□□ 0.84
SOX4-201ENST00000244745 CYP2R1Q6VVX0 501 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 LUZP2Q86TE4 346 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 DHFR2Q86XF0 187 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 ANKRD6Q9Y2G4 727 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.3■□□□□ 0.84
SOX4-201ENST00000244745 A0A0B4J269 797 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 KANSL1LA0AUZ9 987 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 B3GAT3O94766 335 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 ERVK-10P10266 1014 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 CCDC130P13994 396 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 CDH17Q12864 832 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 ZNF177Q13360 481 aaPredicted RBP20.3■□□□□ 0.84
SOX4-201ENST00000244745 MRPL42Q9Y6G3 142 aaKnown RBP20.3■□□□□ 0.84
SOX4-201ENST00000244745 PLA2G6O60733 806 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 PIAS1O75925 651 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 ACAT1P24752 427 aaKnown RBP20.3■□□□□ 0.84
SOX4-201ENST00000244745 SLC6A3Q01959 620 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 TRAF2Q12933 501 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 TRIM69Q86WT6 500 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 DNERQ8NFT8 737 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 RMND5AQ9H871 391 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 TBC1D13Q9NVG8 400 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 SH3BP1Q9Y3L3 701 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 PCDHA11Q9Y5I1 949 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 ASNA1O43681 348 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 CROCCP3Q8IVE0 287 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 VPS37AQ8NEZ2 397 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 ERVK-5Q9HDB9 667 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 ACTL7BQ9Y614 415 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 MST1RQ04912 1400 aa20.3■□□□□ 0.84
SOX4-201ENST00000244745 A8MUI8 341 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 ALDH1A1P00352 501 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 PKNOX1P55347 436 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 KYAT3Q6YP21 454 aaKnown RBP20.29■□□□□ 0.84
SOX4-201ENST00000244745 MARK2Q7KZI7 788 aaKnown RBP20.29■□□□□ 0.84
SOX4-201ENST00000244745 ADAM32Q8TC27 787 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 NDEL1Q9GZM8 345 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 NCAM2O15394 837 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 AKAP5P24588 427 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 DSG3P32926 999 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 MAPK11Q15759 364 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 C15orf59Q2T9L4 293 aaPredicted RBP20.29■□□□□ 0.84
SOX4-201ENST00000244745 ZFP1Q6P2D0 407 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 ARHGAP23Q9P227 1491 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 CHADO15335 359 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 ZNF682O95780 498 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 ATP5BP06576 529 aaKnown RBP20.29■□□□□ 0.84
SOX4-201ENST00000244745 ANPEPP15144 967 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 FASP25445 335 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 EFEMP1Q12805 493 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 ANKRD13AQ8IZ07 590 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 FAM210AQ96ND0 272 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 OSMRQ99650 979 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 MRPS26Q9BYN8 205 aaKnown RBP20.29■□□□□ 0.84
SOX4-201ENST00000244745 DDX43Q9NXZ2 648 aaKnown RBP20.29■□□□□ 0.84
SOX4-201ENST00000244745 RBAK-RBAKDNI3L0D1 243 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 DDHD2O94830 711 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 TPBGLP0DKB5 382 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 FCGR1AP12314 374 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 CRADDP78560 199 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 SLC25A3Q00325 362 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 DDX39BQ13838 428 aaKnown RBP20.29■□□□□ 0.84
SOX4-201ENST00000244745 PDK3Q15120 406 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 OR8H2Q8N162 312 aa20.29■□□□□ 0.84
SOX4-201ENST00000244745 BHLHE22Q8NFJ8 381 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms