RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 ZCCHC9Q8N567 271 aaKnown RBP18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 SPATA17Q96L03 361 aa18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 HERC2P3Q9BVR0 1158 aa18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 TSPYL1Q9H0U9 437 aa18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 USP29Q9HBJ7 922 aa18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 CXXC1Q9P0U4 656 aaPredicted RBP18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 OR12D3Q9UGF7 316 aa18.54■□□□□ 0.56
KLHDC3-201ENST00000244670 SLC38A8A6NNN8 435 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 SEC24AO95486 1093 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 MOCS2O96007 188 aaPredicted RBP18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 FGBP02675 491 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 RPL10AP62906 217 aaKnown RBP18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 FPGSQ05932 587 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 RASIP1Q5U651 963 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 EMC10Q5UCC4 262 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 HOOK3Q86VS8 718 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 VPS52Q8N1B4 723 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 EPS8L3Q8TE67 593 aaKnown RBP18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 CAPS2Q9BXY5 557 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 SIK2Q9H0K1 926 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 NINJ2Q9NZG7 142 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 NR2E3Q9Y5X4 410 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 FAM92AA1XBS5 289 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 TTC4O95801 387 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 TBX18O95935 607 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 ERCC2P18074 760 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 STIP1P31948 543 aaKnown RBP18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 NR2C2P49116 596 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 EFEMP1Q12805 493 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 PPIGQ13427 754 aaKnown RBP eCLIP18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 KYNUQ16719 465 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 SKIDA1Q1XH10 827 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 TP53INP2Q8IXH6 220 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 C7orf61Q8IZ16 206 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 ARHGAP18Q8N392 663 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 ARHGEF38Q9NXL2 777 aa18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 NOVA2Q9UNW9 492 aaKnown RBP18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 FARP1Q9Y4F1 1045 aaPredicted RBP18.53■□□□□ 0.56
KLHDC3-201ENST00000244670 BCLAF3A2AJT9 711 aaKnown RBP18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 GOLGA8MH3BSY2 632 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 DCLK1O15075 740 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 LRIG2O94898 1065 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 URODP06132 367 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 SRGAP2BP0DMP2 458 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 CCR1P32246 355 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 HPDP32754 393 aaPredicted RBP18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 MORF4L2Q15014 288 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 TTC19Q6DKK2 380 aaPredicted RBP18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 DDX53Q86TM3 631 aaKnown RBP18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 RELL1Q8IUW5 271 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 CDKL3Q8IVW4 592 aaPredicted RBP18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 PRCCQ92733 491 aaPredicted RBP18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 TLCD1Q96CP7 247 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 SERPINB11Q96P15 392 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 RBM15Q96T37 977 aaKnown RBP eCLIP18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 EPAS1Q99814 870 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 ZBED2Q9BTP6 218 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 TMEM109Q9BVC6 243 aa18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 TLR8Q9NR97 1041 aaKnown RBP18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 AFF4Q9UHB7 1163 aaKnown RBP18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 XPO7Q9UIA9 1087 aaKnown RBP18.52■□□□□ 0.56
KLHDC3-201ENST00000244670 SMIM23A6NLE4 172 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 PAGE1O75459 146 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 GJB5O95377 273 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 IVLP07476 585 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 SYN1P17600 705 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 CA8P35219 290 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 BASP1P80723 227 aaKnown RBP18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 GAD2Q05329 585 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 SLC45A4Q5BKX6 768 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 SYCP2LQ5T4T6 812 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 ANKRD22Q5VYY1 191 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 LRRC31Q6UY01 552 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 ZNF461Q8TAF7 563 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 CPT1BQ92523 772 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 C9orf72Q96LT7 481 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 OLFM3Q96PB7 478 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 QKIQ96PU8 341 aaKnown RBP eCLIP18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 LGMNQ99538 433 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 FOXP3Q9BZS1 431 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 CYP4F11Q9HBI6 524 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 SHOC2Q9UQ13 582 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 TLDC2A0PJX2 215 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 CFAP69A5D8W1 941 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 EPHB2P29323 1055 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 MAGOHP61326 146 aaKnown RBP18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 XRCC4Q13426 336 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 BRMS1LQ5PSV4 323 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 MIB1Q86YT6 1006 aa18.51■□□□□ 0.55
KLHDC3-201ENST00000244670 NUP205Q92621 2012 aa18.5■□□□□ 0.55
KLHDC3-201ENST00000244670 TCRBV7S3A2A0A539 114 aa18.5■□□□□ 0.55
KLHDC3-201ENST00000244670 ABLIM3O94929 683 aa18.5■□□□□ 0.55
KLHDC3-201ENST00000244670 VAV1P15498 845 aa18.5■□□□□ 0.55
KLHDC3-201ENST00000244670 SLCO1A2P46721 670 aa18.5■□□□□ 0.55
KLHDC3-201ENST00000244670 TUFMP49411 452 aaKnown RBP18.5■□□□□ 0.55
KLHDC3-201ENST00000244670 PAFAH1B3Q15102 231 aaKnown RBP18.5■□□□□ 0.55
KLHDC3-201ENST00000244670 C10orf120Q5SQS8 335 aa18.5■□□□□ 0.55
KLHDC3-201ENST00000244670 RWDD4Q6NW29 188 aaKnown RBP18.5■□□□□ 0.55
KLHDC3-201ENST00000244670 MSANTD2Q6P1R3 559 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms