RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 RIN2Q8WYP3 895 aaPredicted RBP13.68□□□□□ -0.22
SLIRP-201ENST00000238688 ART4Q93070 314 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 PBXIP1Q96AQ6 731 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 CDK5RAP1Q96SZ6 601 aaKnown RBP13.68□□□□□ -0.22
SLIRP-201ENST00000238688 FERMT1Q9BQL6 677 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 CLSTN3Q9BQT9 956 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 SNRNP25Q9BV90 132 aaKnown RBP13.68□□□□□ -0.22
SLIRP-201ENST00000238688 HEMGNQ9BXL5 484 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 CALN1Q9BXU9 219 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 RHOBTB2Q9BYZ6 727 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 PCDH18Q9HCL0 1135 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 IL37Q9NZH6 218 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 LIMD1Q9UGP4 676 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 PCSK1NQ9UHG2 260 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 AP4E1Q9UPM8 1137 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 SCML2Q9UQR0 700 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 NEU2Q9Y3R4 380 aa13.68□□□□□ -0.22
SLIRP-201ENST00000238688 CCDC195A0A1B0GUA6 201 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 FAM170AA1A519 330 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 HACD1B0YJ81 288 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 H3BRJ5 948 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 I3L4J1 428 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 TNFRSF10BO14763 440 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 APOL1O14791 398 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 ADAM12O43184 909 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 DAPK3O43293 454 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 OPA1O60313 960 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 PPFIA2O75334 1257 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 GRAP2O75791 330 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 ZMYND10O75800 440 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 SEC31AO94979 1220 aaKnown RBP13.67□□□□□ -0.22
SLIRP-201ENST00000238688 GLUD1P00367 558 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 MYBL2P10244 700 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 SLC2A3P11169 496 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 ATF2P15336 505 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 ECHS1P30084 290 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 EIF3BP55884 814 aaKnown RBP13.67□□□□□ -0.22
SLIRP-201ENST00000238688 NOMO1Q15155 1222 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 TAF5Q15542 800 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 CDO1Q16878 200 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 SMTNL2Q2TAL5 461 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 ATP13A4Q4VNC1 1196 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 TXNRD3NBQ6F5E7 133 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 SLC8B1Q6J4K2 584 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 RFX6Q8HWS3 928 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 RELL1Q8IUW5 271 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 NUP93Q8N1F7 819 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 TDRD5Q8NAT2 981 aaKnown RBP13.67□□□□□ -0.22
SLIRP-201ENST00000238688 C1orf54Q8WWF1 131 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 PIK3R5Q8WYR1 880 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 HSPH1Q92598 858 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 P3H4Q92791 437 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 RTP4Q96DX8 246 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 CCDC114Q96M63 670 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 PEBP4Q96S96 227 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 LPIN3Q9BQK8 851 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 FRMD8Q9BZ67 464 aaPredicted RBP13.67□□□□□ -0.22
SLIRP-201ENST00000238688 BRD8Q9H0E9 1235 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.67□□□□□ -0.224e-7■■□□□ 12.6
SLIRP-201ENST00000238688 OLA1Q9NTK5 396 aaKnown RBP13.67□□□□□ -0.22
SLIRP-201ENST00000238688 ZDHHC18Q9NUE0 388 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 DONSONQ9NYP3 566 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 ASIC3Q9UHC3 531 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 HPCAL4Q9UM19 191 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 SORCS3Q9UPU3 1222 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 ZNF148Q9UQR1 794 aa13.67□□□□□ -0.22
SLIRP-201ENST00000238688 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-201ENST00000238688 GOLGA6BA6NDN3 693 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 NCAM2O15394 837 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 L1CAMP32004 1257 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 ACTN2P35609 894 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 GRIK1P39086 918 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 TUFMP49411 452 aaKnown RBP13.66□□□□□ -0.22
SLIRP-201ENST00000238688 CXCR3P49682 368 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 DEUP1Q05D60 604 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 CBLBQ13191 982 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 MORF4L2Q15014 288 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 SLC39A12Q504Y0 691 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 ANKRD20A8PQ5CZ79 823 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 KCNT1Q5JUK3 1230 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 DAB2IPQ5VWQ8 1189 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 TPGS2Q68CL5 300 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 MSANTD2Q6P1R3 559 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 SCYL2Q6P3W7 929 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 RSPO2Q6UXX9 243 aaPredicted RBP13.66□□□□□ -0.22
SLIRP-201ENST00000238688 GSTA5Q7RTV2 222 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 LRRTM3Q86VH5 581 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 HOOK3Q86VS8 718 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 FBXL6Q8N531 539 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 PRSS33Q8NF86 280 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 ACTL9Q8TC94 416 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 CLEC4CQ8WTT0 213 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 OVCA2Q8WZ82 227 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 KCNK16Q96T55 309 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 TRIM51Q9BSJ1 452 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 KCNH6Q9H252 994 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 WDR6Q9NNW5 1121 aaKnown RBP13.66□□□□□ -0.22
SLIRP-201ENST00000238688 CLIC5Q9NZA1 410 aa13.66□□□□□ -0.22
SLIRP-201ENST00000238688 GRHL1Q9NZI5 618 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms