RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 C2CD2Q9Y426 696 aa8.54□□□□□ -1.04
CDC27-201ENST00000066544 CIB2O75838 187 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 LUC7L3O95232 432 aaKnown RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 ALDOAP04075 364 aaKnown RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 ZCCHC18P0CG32 403 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 KLC1Q07866 573 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 USP4Q13107 963 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 LAMC2Q13753 1193 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 RALGPS1Q5JS13 557 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 PRAMEF19Q5SWL8 479 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 NCBP2-AS2Q69YL0 99 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 SCUBE1Q8IWY4 988 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 OR52K1Q8NGK4 314 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 TLE6Q9H808 572 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 SNX10Q9Y5X0 201 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 M0QYT0 321 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 TKTP29401 623 aaKnown RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 SLC34A1Q06495 639 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 PDE1CQ14123 709 aaPredicted RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 C10orf107Q8IVU9 208 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 KBTBD2Q8IY47 623 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 ANKRD13AQ8IZ07 590 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 GPC2Q8N158 579 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 ENDOVQ8N8Q3 282 aaKnown RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 PYDC1Q8WXC3 89 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 OXCT2Q9BYC2 517 aaPredicted RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 KCNK4Q9NYG8 393 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 TMEM216Q9P0N5 145 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 SLC7A8Q9UHI5 535 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 DNAJC25-GNG10A0A024R161 153 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 GOLGA8QA0A0J9YX86 632 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 EME2A4GXA9 379 aaPredicted RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 GOLGA8OA6NCC3 632 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 GOLGA8NF8WBI6 632 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 TSHRP16473 764 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 NUMBP49757 651 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 PACS1Q6VY07 963 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 HFE2Q6ZVN8 426 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 DPP9Q86TI2 863 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 WDR75Q8IWA0 830 aaKnown RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 BEST2Q8NFU1 509 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 ZNF333Q96JL9 665 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 MED10Q9BTT4 135 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.53□□□□□ -1.041e-6■□□□□ 8.1
CDC27-201ENST00000066544 SIRPGQ9P1W8 387 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 FAM159BA6NKW6 160 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 TRDMT1O14717 391 aaKnown RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 TGDSO95455 350 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 STILQ15468 1287 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 SYPL2Q5VXT5 272 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 TRIM42Q8IWZ5 723 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 KIAA1257Q9ULG3 409 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 MDM4O15151 490 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 DYNC1LI2O43237 492 aaPredicted RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 BEST1O76090 585 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 LINGO3P0C6S8 592 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 ATXN3P54252 364 aaPredicted RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 SARNPP82979 210 aaKnown RBP8.53□□□□□ -1.04
CDC27-201ENST00000066544 C6orf163Q5TEZ5 329 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 RASSF3Q86WH2 238 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 ULK2Q8IYT8 1036 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 ARHGAP24Q8N264 748 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 USP33Q8TEY7 942 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 CDKL2Q92772 493 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 C16orf70Q9BSU1 422 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 VRTNQ9H8Y1 702 aa8.53□□□□□ -1.04
CDC27-201ENST00000066544 ASB14A6NK59 587 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 SDR42E2A6NKP2 422 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 NEMP1O14524 444 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 HOXA11P31270 313 aaPredicted RBP8.52□□□□□ -1.04
CDC27-201ENST00000066544 SLC1A6P48664 564 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 FBXO47Q5MNV8 452 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 TAPT1Q6NXT6 567 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 ATG14Q6ZNE5 492 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 TMPRSS6Q8IU80 811 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 TEKT4Q8WW24 435 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 ZNF778Q96MU6 729 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 TUBB6Q9BUF5 446 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 LRRC4Q9HBW1 653 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 PNPLA8Q9NP80 782 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.52□□□□□ -1.04
CDC27-201ENST00000066544 PCDHA11Q9Y5I1 949 aa8.52□□□□□ -1.04
CDC27-201ENST00000066544 RGPD3A6NKT7 1758 aaPredicted RBP8.52□□□□□ -1.05
CDC27-201ENST00000066544 RGPD4Q7Z3J3 1758 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 A0A0A0MRY4 1105 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 E9PBE3 544 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 ADCY6O43306 1168 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 MAP3K7O43318 606 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 KLHL41O60662 606 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 HNRNPCL1O60812 293 aaKnown RBP8.52□□□□□ -1.05
CDC27-201ENST00000066544 BST2Q10589 180 aaKnown RBP8.52□□□□□ -1.05
CDC27-201ENST00000066544 IFRD2Q12894 506 aaPredicted RBP8.52□□□□□ -1.05
CDC27-201ENST00000066544 DPYSL2Q16555 572 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 RNF220Q5VTB9 566 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 RNF139Q8WU17 664 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 C7orf26Q96N11 449 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 SPATA13Q96N96 652 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 AGAP2Q99490 1192 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 TAGLN3Q9UI15 199 aa8.52□□□□□ -1.05
CDC27-201ENST00000066544 PPM1HQ9ULR3 514 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms