RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Cldn24D3YXJ9 220 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Trim5E9PV98 497 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Kng1O08677 661 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 NoctO35710 429 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Klc2O88448 599 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 MutP16332 748 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Tac1P41539 130 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 EdnrbP48302 442 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ccna2P51943 422 aaKnown RBP13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 DmpkP54265 631 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Fermt1P59113 677 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Thumpd3P97770 505 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Eml1Q05BC3 814 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Srbd1Q497V5 1015 aaKnown RBP13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 PigaQ64323 485 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 RetsatQ64FW2 609 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Brsk2Q69Z98 735 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Sp140Q6NSQ5 534 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Arhgap15Q811M1 481 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Zdhhc15Q8BGJ0 337 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Fam163bQ8BUM6 167 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Pde10aQ8CA95 790 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Tp53inp2Q8CFU8 221 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Nudt13Q8JZU0 352 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Colgalt1Q8K297 617 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Tbc1d13Q8R3D1 400 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ubap2Q91VX2 1132 aaKnown RBP13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Pdia5Q921X9 517 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ndufa10Q99LC3 355 aaKnown RBP13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ecrg4Q99LS0 148 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Gtf2ird2Q99NI3 936 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Vps28Q9D1C8 221 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 GOLGA7BQ9D428 167 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ppil2Q9D787 521 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Borcs5Q9D920 195 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Plin3Q9DBG5 437 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Nrip2Q9JHR9 270 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 RalbQ9JIW9 206 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ripk3Q9QZL0 486 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Dnajc12Q9R022 198 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Tle6Q9WVB3 581 aa13.48□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Cntnap5aQ0V8T9 1304 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Pramef17A2ASJ1 475 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Zfp990B1AVN5 605 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Adamts6D3Z1A5 1117 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 PtproE9Q612 1226 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 AvilO88398 819 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Akap10O88845 662 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Shmt1P50431 478 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Fmo3P97501 534 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Lypla1P97823 230 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Trafd1Q3UDK1 580 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Agap2Q3UHD9 1186 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Trappc3lQ4KL14 181 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Q6GQV0 436 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Dync1li2Q6PDL0 492 aaKnown RBP13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ccdc154Q6RUT8 657 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Spata20Q80YT5 790 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Best2Q8BGM5 508 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Hsdl1Q8BTX9 330 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Scara3Q8C850 606 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Zbtb8bQ8CII0 484 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ipo11Q8K2V6 975 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Prpf19Q99KP6 504 aaKnown RBP13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Tagln3Q9R1Q8 199 aa13.47□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Cdr2lA2A6T1 465 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Olfr1160A2AVT0 319 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Mkrn2osD3Z393 217 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Top6blJ3QMY9 579 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 LgmnO89017 435 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Cd3gP11942 182 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 SagP20443 403 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 LynP25911 512 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Alox15P39654 663 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Irf6P97431 467 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Pecam1Q08481 727 aaKnown RBP13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Samd11Q1RNF8 542 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Snx27Q3UHD6 539 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Gcnt3Q5JCT0 437 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Pde1aQ61481 565 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 RgnQ64374 299 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Rnf220Q6PDX6 566 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Rxfp1Q6R6I7 758 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Thnsl1Q8BH55 747 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Spata21Q8BHW6 681 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Tgm6Q8BM11 706 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ephb1Q8CBF3 984 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Prpf39Q8K2Z2 665 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Ddx18Q8K363 660 aaKnown RBP13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Rem2Q8VEL9 341 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Wbp11Q923D5 641 aaKnown RBP13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 NonoQ99K48 473 aaKnown RBP13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Sike1Q9CPR7 207 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 4930519G04RikQ9CPT7 205 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Acbd6Q9D061 282 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Fip1l1Q9D824 581 aaKnown RBP13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Gpr45Q9EQQ4 373 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Jph2Q9ET78 696 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 Tnfrsf10bQ9QZM4 381 aa13.46□□□□□ -0.25
Ssr1-203ENSMUST00000225246 PignQ9R1S3 931 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms